Oncorhynchus kisutch (coho salmon): 109891120
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Entry
109891120 CDS
T09179
Name
(RefSeq) interferon regulatory factor 6 isoform X1
KO
K10154
interferon regulatory factor 6
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109891120
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109891120
Transcription factors [BR:
oki03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
109891120
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109891120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
109891120
NCBI-ProteinID:
XP_020339032
Ensembl:
ENSOKIG00005024534
UniProt:
A0A8C7HLW3
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All DBs
Position
LG5:complement(46062139..46072164)
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AA seq
496 aa
AA seq
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MDSKYLTCPLWPPPQTISMALTPRRVRLKPWLVDQVDSGFYPGLVWIDRDNKRFRIPWKH
ATRHTPQHEEENTIFKAWALETGKFQEGIDDPDPAKWKAQLRCALNKSREFNLVYDGTKE
VPMNPLKIYDICDIPQPLSNPGSSDPGSWTPNDGDEDESDGSEPLPPYPKSNGTSPALMW
SPPGSVSPLQPPSCPPSVEVWPKEEPLDMEMQPSPLEMAPPPTLDMPPPPMPDVMFASPE
MWISSLPMTDLEVQFQYRGKEVCPAMTVSNPQGCRLFYGDLGPMVNQEELFGPISLEQLR
FPSTEHIANDTQRVFTNRLLDVMDRGLVLEISGHDIYAIRLCQCKVYWSGPCAPNPKAPN
LIERQRKIKLFCLESFLSDVIAHQRGQSASPPQFDINLCFGEEWPDSRPKEKKLIMVQII
PVVARMITEMFSGDCMRSFDSGSVRLQISIPDIKDNIVTHLKQLYRLLQTHQGQEGWPQA
LAPGAGMHLSPALHAQ
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggatagtaaatatctaacctgcccattgtggccccctccccagacaataagcatggcg
ttgaccccgcggcgtgtccggctcaagccctggctagtggaccaggtggacagtgggttc
tacccaggcctggtgtggattgaccgagacaataagcgcttcaggatcccctggaaacac
gctacacggcacaccccccagcacgaggaagaaaacactatttttaaggcctgggcgtta
gagaccggaaagttccaggagggtattgatgatcctgaccctgccaagtggaaagctcag
ctccgctgcgccctcaacaagagcagagagttcaaccttgtctacgacggcaccaaagaa
gtccccatgaaccccctgaagatctacgacatctgtgacatcccacagcccctcagtaac
ccaggatcttcagaccctgggtcttggacaccaaatgatggggatgaagatgaatcagat
ggctcagagcccctccctccttatccaaaatccaacggcaccagccccgctcttatgtgg
tctccaccggggtctgtatcgcccctccaaccccccagctgccccccatcagttgaagtg
tggcccaaagaggagcctttggatatggagatgcagccttcgcccctggagatggcgccc
cctcccacactggacatgcctccccctcccatgcctgacgtgatgttcgcctccccagag
atgtggatcagctccttgcctatgacagacctggaggtgcagttccagtaccgtggtaag
gaggtgtgtccagccatgacggtcagtaacccccagggctgtaggcttttctacggggac
ctaggtcccatggtcaaccaggaggagttgtttggtcctatcagcctggagcagctgagg
ttcccctctactgagcacatcgccaacgacacgcagagggtcttcaccaaccgcctgctg
gatgtcatggaccgaggcctcgtcctggagatcagcggccatgacatctatgccatccgc
ctctgccaatgcaaggtgtactggtcaggcccttgcgcccccaaccccaaagcacccaac
ctcatagagaggcagaggaagatcaagctgttctgtctggagtcctttctcagtgatgtg
atagcccatcagaggggccagtcggccagccctcctcagtttgacatcaacctgtgcttc
ggagaggagtggcctgacagcagacccaaagagaagaagctcatcatggtgcagattatt
ccagtggtagcacgtatgatcactgagatgttctcaggcgactgcatgcgctccttcgac
agcggcagcgtgcgcctgcagatctccatcccagacatcaaggacaacatcgtgacccac
ctgaagcagctgtaccgcctgctgcagacccaccagggccaggaaggctggcctcaggct
ctggccccaggagccggcatgcacctgtccccggccctgcatgcccagtga
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