KEGG   Oncorhynchus kisutch (coho salmon): 109891124
Entry
109891124         CDS       T09179                                 
Name
(RefSeq) methylosome protein 50-like
  KO
K13221  methylosome protein 50
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oki03041]
    109891124
Spliceosome [BR:oki03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    109891124
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_EML_2 WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_RIG_1st Beta-prop_SCAP NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 MIOS_WD40
Other DBs
NCBI-GeneID: 109891124
NCBI-ProteinID: XP_020339038
Ensembl: ENSOKIG00005024573
LinkDB
Position
LG5:complement(46104489..46117795)
AA seq 338 aa
MKSTVNANMIKENGWNIPPNAPACMEKHLESAQYRGDGTLLLVASSLTGRCWQGSIWVYC
DPKQSPNEGFCKAGVQTEAGITEAKWVSERGVLVASDSGAVELWELSEDESLLEKRFAKL
EHDHIVTSVSPAGSSHAISGSMDNRIKVWDLIQGEVVSTYNAHSKPVTCVSCNPSNDSLF
LSCGQDGRLLLWDRRKPTKPASRLDVEPSCCPTSVAWHPHHRTTIAYGDELGRVTLKDFQ
GTEPGQTQSTHSRRVSGLAFSSHSAPLLASISDDCTVAVMNSELKETLRDKRHQDFVRGV
CWAPGGSDTLTTVGWDHQVLHHVMGQDGPATGYSTSPL
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgaaaagtacagtaaatgccaatatgataaaggaaaacggatggaacatacccccaaat
gcccccgcgtgtatggagaagcatttggagtcggcgcagtacaggggagatggcaccctg
ttgttggtggcctccagtctgacaggcaggtgctggcagggatccatctgggtctactgt
gatcccaagcagtctcccaacgagggcttctgtaaggctggtgtccagacagaggcagga
atcacagaggcaaagtgggtttcagagaggggtgtcctagttgcatctgactctggtgct
gttgagctgtgggagctatcagaggatgagagtctgctggagaaacggttcgccaaactc
gagcatgatcacatcgttaccagcgtgagccctgctgggtcaagccatgccatcagcggc
agtatggacaaccgaatcaaagtctgggaccttattcagggtgaagtggtcagcacatat
aatgctcactcgaagccagtcacttgtgtgtcctgcaatccatccaatgactccctcttc
ctctcatgtggccaggatggtcgtttgttgctttgggacaggaggaaacccaccaaacca
gcctctagattagacgtagagcccagctgttgtcctacatcagtagcctggcatccccac
cacaggaccacaatcgcctacggtgacgagctgggacgagtgacactgaaggactttcag
ggaacagagcctggccagacacagagcacccacagccgcagggtctccggcctagccttc
tcatcacacagtgcccccttgcttgcctcaatcagtgatgactgcactgttgctgtgatg
aactctgagcttaaggaaacgttgagagacaagaggcaccaggactttgttcggggtgtc
tgctgggcccctggcggttctgacacactgaccactgtgggctgggaccaccaggtcctc
caccacgtcatgggacaggatggacccgccactggatactccacgtccccactgtag

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