Oncorhynchus kisutch (coho salmon): 109891276
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Entry
109891276 CDS
T09179
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2 isoform X1
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
109891276
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oki02000
]
109891276
Transporters [BR:
oki02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
109891276
SSDB
Ortholog
Paralog
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
109891276
NCBI-ProteinID:
XP_020339285
Ensembl:
ENSOKIG00005001261
LinkDB
All DBs
Position
LG5:complement(54749139..54770893)
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AA seq
648 aa
AA seq
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MAKHNDPDIRFNKMAHQEIGLVQPVPVANTQTRGQWSSKLEFLLAVAGQIIGLGNVWRFP
YLCYKNGGGVFFIPYVLFLFTCGIPLFLLETSLGQYTTQGSITCWRKICPLFEGLGYGGQ
VVVLYSSIYYIIILAWAFFYLFSSFSSELPWASCRNSWNTATCVEFDRRVVGYLNWTITG
NATSPVREFWERRVLNLTDSVYKLGNIRWDLSLCLLLSWIICYFCVWKGVKSTGKVVYFT
ATFPYVMLLVLLVRGLTLPGAIDGIKFYLYPDPARLADPQVWMDAGTQIFYSYAICIGCL
TALGSYNKYDNNCYKDCVYLCLLNSGTSFVAGFSIFSVLGFMAYEQRTDIATVAESGPGL
AFIAYPRAVAMMPVPQLWAIFFFIMIILLGLDSQFVGLEALMTAISDMYPSFFLVGHRRK
ILLLIISVGSFFIGLVMVTEGGLYIFQLFDYYACSGMTLLLFAILQSVCVSWVYGADRLY
DNIEDMIGYRPLPLIKYCLKYITPVICTATFVFSLIRFTPLKFNNTFEYTWWGYAIGWWF
TLSSTLIVPLWMVYIVSVTPGTLRQRLSILTTPSEDLPITKAQKKALLAKQSEQDRPLGD
MKIPAWGHNLIDRDTLSLAHHPYRPGDKQVQPVTHSPKGCDTVTLCLV
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcataatgatcccgatataaggttcaataagatggcccaccaggagataggt
ctggtccagcctgtccctgtggccaacacccagaccaggggacagtggtccagcaagctg
gagttcctcctggctgtggccggacagatcatcggcctggggaatgtatggcggttccca
tacctgtgctacaaaaatgggggaggggtgttcttcatcccttatgtgcttttcctgttc
acctgtggcattcccctctttcttctggagacctccctgggccagtacaccacgcagggc
agcatcacctgctggaggaagatctgccccctgtttgaaggactgggttatggtggtcag
gtggtagttctgtattccagcatctattacatcatcatcctggcctgggccttcttctac
ctcttctcctcgttcagctctgagctcccctgggccagttgtagaaacagctggaacaca
gcaacctgcgtggagtttgacagaagagtagtaggctatctaaactggacaataacagga
aacgcaacatcgccagtgagagagttctgggagagaagagttttgaatctcacagacagt
gtctacaagcttggaaatattcgctgggacctatctttgtgtcttctattgtcctggatt
atctgttacttctgtgtctggaaaggagtgaagtctactgggaaggtggtctatttcact
gccaccttcccctatgtgatgctgttggtattgctagttcgtggactcacactgccaggg
gccatagatggtatcaagttctacctttacccagatccagcccgcctcgctgacccacag
gtgtggatggatgctggaacacaaatcttctactcctatgcgatctgcatcggctgcctg
accgcccttggcagctataacaagtatgacaacaactgttacaaggactgtgtgtacctg
tgccttttgaacagcggaaccagcttcgtggctggtttttctatcttctctgtactgggc
ttcatggcttatgaacagaggacagacatcgcaaccgtggccgaatcaggtcctggcctg
gcgttcatcgcctaccctcgtgctgtggccatgatgccagtaccccaactctgggccatt
tttttcttcatcatgatcatcctactggggttagatagtcagttcgtaggtttggaggct
ctgatgacagctatctcagacatgtatccttctttcttcctggttggtcatcggcgtaaa
atactcctcctcatcattagtgtgggtagcttcttcatcggcctggtcatggtcacagag
ggaggcctgtatatcttccagctgtttgattactatgcctgcagtgggatgactctcctt
ctctttgccatactacagtcagtgtgtgtcagctgggtttatggtgcagatcgtctgtac
gataatatagaggacatgatcggttatcgaccattacccctcattaagtactgtttgaag
tatatcactccagtcatctgcactgctacgtttgtcttctccttgattaggtttaccccg
ctaaagttcaacaacacctttgagtatacttggtggggttacgccattggctggtggttc
accctctcctccacactcatagttcctctgtggatggtgtacattgtgagtgtcactcct
ggtacactgcgacagagactgtctatcctcaccacgccctcagaggatctccctattacc
aaggcccagaaaaaggccctcctggccaagcagtccgagcaggacagacctctgggggac
atgaagataccagcgtggggccacaatctcatagacagagacactctctcgctcgcccac
catccctacaggcctggagacaagcaggtccagccagtcactcactctcctaaaggttgt
gacactgtgacactgtgtttggtctga
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