KEGG   Oncorhynchus kisutch (coho salmon): 109891293
Entry
109891293         CDS       T09179                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
  KO
K14793  ribosomal RNA-processing protein 9
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:oki03009]
    109891293 (rrp9)
Ribosome biogenesis [BR:oki03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    109891293 (rrp9)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_IP5PC_F Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_IFT140_1st PEP5_VPS11_N Beta-prop_DCAF12 Beta-prop_WDR75_2nd WD_LRWD1 Beta-prop_WDR19_1st WDR54 WD40_like Beta-prop_BBS7 LAIKA
Other DBs
NCBI-GeneID: 109891293
NCBI-ProteinID: XP_020339314
Ensembl: ENSOKIG00005005104
LinkDB
Position
LG5:56189753..56194508
AA seq 482 aa
MSSFFIKKKGPPKVFKKSENSAGSKRKNDGDTGNKLKKKLNSKHNEEISSDSETEGPAVH
RKRRANVEEEFDETPQEKKLRLAKLYLDQLRDEEEKKAEEESFETDLIAGRLQEEVLEQK
GKLQRMVAKDLLPPDTSEIRLLRGHKLPVTCLVISPDDKHIFSAAKDCSIIKWDVENGKR
LHTIAGGRKGTEDRHVGHTAHVLCISISSDGKYLATGDMNKLIMIWEAATCKHLYKFTGH
RGPVSGLSFRRGTHDLYSASHDRSIKVWNVDENAYVETLFGHQDVITGLDSGSRERCVTA
GGRDRTVRVWKIAEESQLVFHGHEGSIDCIQLINEEHMITGADDGSVSLWSVNKKKPLST
VKAAHGRHGDSGLEQPYWVAAVAALQNSDTVASGSHNSKVQLWKCGQGFRHLEPLFTIPV
PGFVNSLKFSSSGKFLVAGVGQEHRLGRWWRLKEAKNGLYIIPLKRQQPEQEGVQNGEEN
GV
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgtcgtctttctttataaagaaaaaaggacctccaaaggttttcaaaaagagcgagaat
tcagcgggttccaaacgaaagaatgatggagacacgggaaacaaactcaagaagaagctc
aattcaaagcacaatgaagaaatctccagcgactctgaaactgaaggccctgcagtgcac
agaaaaaggagggccaatgtcgaagaagagtttgacgagactccacaggaaaagaaacta
cgattggccaagctctaccttgaccaattgagggatgaggaagaaaagaaagcagaggaa
gagtcttttgagactgacctgatagctggaagacttcaagaagaagtgcttgaacagaaa
ggaaagcttcaacggatggttgcaaaagatctcctgccaccagacacgtcagagattcgt
ctgttgagaggccacaagctgccagtcacctgtctggtcatctctcctgatgacaagcac
atcttctctgctgccaaagactgctccatcatcaaatgggatgtagagaatggtaagaga
ctgcacacaatagctggtgggaggaaaggaacagaggatcgccatgttggacatacagcc
catgtcctgtgtatctccatatcgtcggacggcaagtacctggcaacgggagacatgaat
aagttgatcatgatttgggaggcggcaacatgtaaacacctgtacaagttcacaggacat
agaggccctgtgtcgggactgtccttcaggaggggcacccatgacctgtacagtgcctct
cacgaccgttccatcaaggtgtggaatgtggatgaaaacgcctatgtggaaaccctattt
ggtcaccaggatgtgatcacagggctggacagtgggagtcgggagcgctgtgtgacagca
ggggggagggaccgcactgtgagggtgtggaagattgccgaggagtcccagctagtgttc
catggccatgagggctccatcgactgtatccagctcattaacgaagaacacatgataaca
ggtgctgatgatggttccgtctccctctggagtgtgaacaagaagaagccactcagcacg
gtgaaggcagcccacggtcggcatggtgactcggggctggagcagccctactgggtggca
gccgtggcggctctgcagaactctgacaccgtagcctcaggttcacacaactctaaggtg
cagctgtggaagtgtggccaggggttccgtcacctggagcctctcttcaccatccctgtg
cctggttttgtcaacagtctgaagttctccagctctgggaagttcctagtggcaggagta
ggacaggagcacaggcttggtcggtggtggagactgaaggaagcaaagaacggactctac
attattcctctgaaaagacaacagccagagcaggaaggggtccagaatggagaagagaat
ggggtttag

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