KEGG   Oncorhynchus kisutch (coho salmon): 109891374
Entry
109891374         CDS       T09179                                 
Name
(RefSeq) WD repeat-containing protein 1-like
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:oki04990]
    109891374
Domain-containing proteins not elsewhere classified [BR:oki04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   109891374
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_TEP1_C eIF2A Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 PEP5_VPS11_N NBCH_WD40 RMC1_N Beta-prop_SCAP Beta-prop_NUP159_NUP214 Beta-prop_RIG_1st PROPPIN Beta-prop_ELP1_1st Beta-prop_WDR11_1st DUF5711 DUF7165 Beta-prop_DCAF12 HPS3_N WD40_RFWD3 Beta-prop_ELP1_2nd PQQ
Other DBs
NCBI-GeneID: 109891374
NCBI-ProteinID: XP_020339450
Ensembl: ENSOKIG00005029565
LinkDB
Position
LG5:60522575..60538471
AA seq 606 aa
MTYDLKHVFASLPQMERGVAKVLGGDPKGNNFLYTNGKSVIIRNIDNPAIADIYTEHPHQ
VTVAKYAPSGFYIASGDVSGKIRIWDTTQKEHLLKYEYQPFGGKIKDIAWTEDSKRIACV
GEGREKFGAVFLWDTGSSVGEISGHSKIINSVDIKQTRPYRLITGSDDNCGAFFEGPPFK
FKFSSTDHSRFVNCVRFSPDGNRFCTAGADGQIFLYDGKTGEKLGALGGAKAHEGGVYAV
SWSPDSSQLISASGDKTVKLWDVGTSMALTTFNMGADVMDQQLGCLWQKDHLLSISLSGY
INYLDKSNPDRPLRTIKGHSKSIQSLTVHKNKGRAYIYSGSHDGHINYWDAETGENNCFS
GKGHSNLVTKMVVDEADQLVTCSMDDTVRFTSVTKKEYSASNLVKMDVQPKHVSVATGGL
TLAVCIGQVVLLKDQKKVFMLDSLDYEPEAGAIHPGGSTAAVGGADGKVHLYSVQGNTLK
DEGKSMEAKGPVTDMAYSKDGAYLAVTDEKKVVTVFTVADDYAVKNDFYGHHAKVVTLAW
SPDNEHFASGGMDMMVYVWTVNDADKRLKIPDAHRLHHVSGLAWIDEHTLVTTSHDASIK
QWTLKF
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgacctatgatttgaagcatgtatttgccagcctcccgcagatggagcgaggagttgcc
aaagtccttggtggagatcccaaaggcaacaacttcctctacaccaatgggaagagtgtc
atcatcaggaacatagataaccctgccatagctgacatctacaccgagcaccctcatcaa
gttactgttgccaagtatgctcccagtggcttctacattgcgtctggagatgtgtctggt
aagatccgtatctgggacactacccagaaggagcaccttctgaagtacgagtaccagcct
tttgggggcaaaatcaaggacatcgcctggactgaggacagcaaaaggattgcttgtgtg
ggagagggacgtgagaagtttggggctgtgttcctgtgggacactggctcctcagtgggc
gagatctcgggccactccaaaatcatcaacagcgtggacatcaagcagactcgcccctac
cgcctcatcaccggcagtgatgacaactgtggggccttctttgagggaccccctttcaag
ttcaagttctcaagcacagaccacagccggtttgtcaactgcgtgcgtttctctccagac
gggaaccgcttctgtacggctggcgctgacggtcagatctttctatacgacggaaagact
ggcgagaagcttggggctctgggtggagcgaaggcccacgaaggaggagtttatgccgtg
agctggagccctgacagctcccagctcatctctgcctcgggtgacaagactgtgaagctg
tgggatgtgggcaccagcatggccctcaccaccttcaacatgggtgccgacgtcatggac
cagcagctgggctgcctgtggcagaaggaccacctgctcagcatatccctgtcgggctac
atcaactacctggataagagcaaccccgaccggccgctccgcaccatcaagggtcacagc
aaatccattcagtccttgaccgttcacaaaaacaaggggagggcttacatctactctggc
agccatgacgggcacatcaattactgggatgccgagaccggggagaacaactgcttctca
gggaagggccacagcaaccttgtcaccaagatggtagtggacgaggccgaccagctggtg
acttgcagcatggatgacacagtccgcttcaccagcgtgacaaagaaagaatacagtgct
tccaacctggtaaagatggacgtccagcctaaacatgtttccgtagcaacaggggggctc
acattggccgtgtgcattggacaggtggtgttgctgaaggaccagaagaaggtgttcatg
ctggacagtctggactacgagcctgaagcaggagccatccacccaggaggcagcactgcg
gcagtgggcggcgcagatgggaaggtccacttgtattctgtccaaggcaacactctgaag
gatgaggggaagagcatggaggccaaagggccagtcacagacatggcctactccaaagac
ggagcctacctggctgtcactgatgagaagaaggtcgtcacagttttcaccgtggcggat
gattacgcggtcaaaaatgatttttatggacaccacgctaaagtagttaccttggcctgg
tcccctgacaatgagcactttgccagcggtggaatggacatgatggtctacgtttggaca
gtgaatgatgcagacaagaggctgaagatcccagatgcccacaggttgcaccatgtcagt
ggcctggcctggatagatgaacacacgctagtgaccacctctcatgacgccagcatcaag
cagtggactcttaaattctga

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