Oncorhynchus kisutch (coho salmon): 109891390
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Entry
109891390 CDS
T09179
Name
(RefSeq) eukaryotic translation initiation factor 4B isoform X1
KO
K03258
translation initiation factor 4B
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
109891390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109891390
03012 Translation factors [BR:
oki03012
]
109891390
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109891390
mRNA cycle factors
Stress granule specific factors
109891390
Translation factors [BR:
oki03012
]
Eukaryotic type
Initiation factors
eIF-4
109891390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
109891390
NCBI-ProteinID:
XP_020339469
Ensembl:
ENSOKIG00005034388
UniProt:
A0A8C7J1C7
LinkDB
All DBs
Position
LG5:62870976..62903291
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AA seq
656 aa
AA seq
DB search
MAAPAKKKGNKKGKTLTLTDFLAEDNGSGGNAPPPQPSYAKSTSWADETDDVEGDVSTSW
HSGEDSYRAPAIDRNILPTAPRSAREPNVDRSRLPRSPPYTAFLGNLPYDVSEESIMDFF
RGLAISAVRLPREPSNPERLKGFGYAEFDDVDSLLRALTLNEENLGNRRIRVDIADQSND
KEGRDNGQMGGRDRMGRMGDMGGPDKTDSDDWRARPTADADDGPPKREESAFGSRDRYGD
RDGPRRDNDRGFGGDRDRGFGGDRDRGFGGDRDGGRDRGFGGRDRYDDRGGESGAFGSRR
DRDDGGRRAFGSGYRRDDDGGGGGRYGDRDRYGGDREDRYERREERGGEGGPTQRPKLVL
KPRSTPKEEEQARSGGGGPAPAAPATAPSSGRASIFGAAKPVDTAAKEREVEEKLQRQLE
EDKSRGFDRKPRDRDRDPSWRSEEPLSERPVTRSRTGSESSQTGSTSGGRVSRRRESERS
VENEVFSGKEDDPPSPGARPTSANSSTSSSKEPLKVMPAPPPKENAWAKRPAVSAGSTPV
SPSDAACPKLSSSSADERGSGRDENKVDGVRRDRGPPRGRGGAAGPGAGRGRGEGANRDR
RREEDRKDNRRDRDSRPAPEPKKYEESPTPKFSSASKYAALLMDSEQGDDAEDSVE
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccagctaagaagaaggggaataagaaggggaagaccctgaccctcactgac
ttcctggcagaggacaatgggagtggaggcaatgctccaccaccgcaacccagctacgcc
aagtccaccagctgggccgacgagacggatgacgtggagggagatgtgtccacctcctgg
cactcaggggaggacagttaccgggccccggccatagatcgcaacatcctgcccacggcg
ccacggtcagcccgcgagcccaacgtggaccggtcgcgcctcccccgcagccccccctac
accgccttcctgggcaacctgccctacgacgtctctgaggaatctatcatggacttcttc
cggggcctggcgatcagtgctgtgcgcttgccacgggagcccagtaacccagagaggctg
aagggctttggctacgccgagtttgatgatgtggactccctcctgagggcgctgactctc
aatgaggagaacctgggaaatcgcaggatccgggtggatattgcagatcagtccaacgac
aaggaggggagagataatggccagatgggaggacgggacaggatgggccgtatgggagac
atggggggccccgacaagacagacagtgacgactggagggcccggcccactgctgacgct
gatgacggacccccaaagagagaggaatccgctttcgggtcacgcgaccgctatggagac
cgtgacgggccgagacgggacaatgaccgtggatttggcggcgaccgggaccgcggattt
ggcggcgaccgggaccgcggatttggcggcgaccgggacggcggcagagaccgcggcttc
ggcggcagggaccgctatgacgaccggggaggtgagagcggagcctttggctcccgcagg
gaccgggatgatggcgggcgacgtgcctttggcagtggctaccgccgtgatgatgacggg
ggtggtggtggccgctacggggatcgggatcgctacggcggggaccgagaggaccgatat
gagaggcgcgaggagagaggtggtgagggtggtcccacccagagacccaagctagtcctg
aagccacgcagcacgcccaaggaggaggagcaggcccgcagcggtggtgggggacctgcc
ccagctgctccagcgactgcccccagctctggccgtgcctccatcttcggagcagccaag
cccgtggacactgcagccaaggagcgggaggtggaggagaaactccagaggcagctggaa
gaggacaagtccaggggctttgatagaaaaccccgtgacagagacagggacccaagttgg
aggagtgaggagccactttctgagcgacctgtaacacgctcccgcacaggaagtgagtca
tcacagactggaagtacatctggaggaagagtctcgcggcgcagagagagcgagcgatcg
gttgagaacgaagtattcagtggtaaggaggatgaccctccctctcccggagctcgccct
acttccgccaactcttccacatcttcctccaaggagcccctcaaggtgatgcccgcacca
ccacccaaggagaatgcctgggccaagcgccctgcggtgagcgcagggtccacccctgtc
tcccccagtgacgcggcatgtcccaaactgagctcaagttctgcagatgaaagaggatct
ggaagggacgagaataaagtggacggtgtgcgtcgggaccggggccccccacgggggaga
gggggggctgcggggcctggagcagggcggggccgaggagaaggggccaacagagatcga
cgaagggaggaagacagaaaggataacagaagagatcgggactcaagaccagcaccagag
ccaaagaaatacgaagagtccccaactcccaaattcagctcagccagtaaatacgccgct
ttgctaatggacagcgagcaaggagacgacgcggaggacagcgtagaataa
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