Oncorhynchus kisutch (coho salmon): 109891424
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Entry
109891424 CDS
T09179
Symbol
ddx27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109891424 (ddx27)
03009 Ribosome biogenesis [BR:
oki03009
]
109891424 (ddx27)
Enzymes [BR:
oki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109891424 (ddx27)
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109891424 (ddx27)
Ribosome biogenesis [BR:
oki03009
]
Eukaryotic type
Pre-60S particles
Helicases
109891424 (ddx27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
PRK
Motif
Other DBs
NCBI-GeneID:
109891424
NCBI-ProteinID:
XP_020339545
Ensembl:
ENSOKIG00005000333
UniProt:
A0A8C7C339
LinkDB
All DBs
Position
LG5:complement(66610694..66625549)
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AA seq
774 aa
AA seq
DB search
MLSDLDLIGTIQDHEDVPEEPDSESDDEDEQPIVLNKKKKALKGHGAGDFSADFEFGERD
GLYSEDWAMADVMAQLKKRKAPTTLDEKIEKVRKKRKTEEKAKTTEKPEIPSEADDDDEE
EEEEEEEEDEKPDIAEDGAEVSNDEDQSGDDGEEFTSGDEEVLTKADTVRDKGRKKTKAE
EPQEAFFEDASNYDDKLMFPDMNLSRPILKAITAMGFKQPTPIQKACVPVGLLGKDICAC
AATGTGKTAAFMLPVLERLIYKPKQTAVTRVLVLVPTRELGIQVHAVARQLAQFTSITTC
LAVGGLDLKSQEVALRMGPDVLIATPGRLIDHLHNTPSFELSQIEILILDEADRMLDEYF
EEQMKEIIRMCAYQRQTMLFSATMSEEVKDLASVSLKQPVRIFVNSNTDVAPYLRQEFVR
IRPAREGDREAIVAALLTRTFQDHVMLFTQTKKQAHRMHILLGLMGLKVGELHGNLSQTQ
RLESLRRFKDEQIDILVATDVAARGLDIDGVKTVINFTMPNTVKHYVHRVGRTARAGKVG
RSVSLVGETERKMLKDIVRKAKTPVKARVLPQEVILKFRDLIEKLEKDVYAVMRLEREER
AMSHSEAQISVAQKRLAQNADEMDPQRMWFQTHDERKKDRMTKALADFDLALRGKKKREK
FIKEGKKKELSSEDRAEFEVLKSQMYAERSAKRDRKPKRARAMPEDEPVQKGAKQKAGKP
AKKSVFDKELTNTSKKALKQYRAGPSFEDKKRLGIPTNKKRGGGFKSKAKFRRK
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgctatcagatttggacctgatcgggacaattcaggaccatgaagatgtgcccgaggag
cctgattcagagtctgacgacgaagatgaacagccaatagtactcaacaagaagaagaaa
gcgttgaagggccatggtgctggggacttcagcgctgactttgagtttggagagagggat
ggactctacagcgaggactgggctatggcagatgtgatggcacagctgaagaagaggaaa
gcccccaccaccttggatgaaaagattgagaaagtacgcaagaagcgcaaaacagaggag
aaggcaaagacgacagaaaaaccagagattccctcagaggcagatgatgatgatgaggag
gaggaggaggaggaggaggaagaagatgagaaacctgatatagctgaagatggggctgag
gtatccaatgatgaagaccagagtggtgatgatggggaggagtttacatcaggggatgaa
gaggttctcaccaaagcagatacggtgagggacaaaggcagaaagaagacaaaggcagaa
gagcctcaagaggccttctttgaagacgcctcaaactatgacgacaaactcatgtttccc
gacatgaacctctccaggcctattcttaaggctatcactgctatgggcttcaagcagccc
actcccatccagaaggcctgtgtacctgtggggcttctgggcaaagacatctgtgcctgc
gctgctaccggcaccggtaagacggcagcgttcatgctccctgtgctggagcgtctcatc
tacaagcccaaacagaccgcagtgacccgtgtgctagtcctggtgcccacgcgtgagctg
ggcatccaggtgcatgccgtggcccgccagctggcccagttcacaagcatcaccacctgc
ctggccgtggggggtctggacctcaaatcccaggaggtggcattgcggatgggccctgac
gtcctgatcgcaacgccaggtcgactgattgaccacctgcacaacacgccctcttttgag
ctcagccagattgagatcctcatcctggacgaggctgaccggatgctggacgagtacttt
gaggagcagatgaaggagatcatcaggatgtgtgcctaccagagacagaccatgctcttc
tctgccaccatgagcgaagaggtgaaagacttggcgtcggtctctctgaagcagccggtt
cgtatctttgtgaacagtaacacagacgtggcgccctacctcagacaggagtttgtcagg
atccgaccagccagggaaggagacagggaggctattgtggccgctctgctgacacggacc
ttccaggaccacgtgatgctgttcacccagaccaagaagcaagcccaccggatgcacatc
ctcctgggcctgatggggctgaaggtgggagagctgcatgggaacctgtcccagacccag
agactggagagcctcaggcggttcaaagatgaacagattgacatccttgtggccacagac
gttgcggctagaggtctggatatcgatggagtcaagacggtgattaacttcaccatgccc
aacacagtgaagcactacgttcacagggtgggtcgcacggcccgtgccggcaaggtcggt
cgctctgtgtccctggtgggcgagaccgagaggaagatgctgaaggacatcgtcaggaag
gccaagacccccgtgaaggcccgcgtcctgccacaagaggtgattctgaagttcagagac
ctgattgagaagctggagaaggacgtgtacgccgtgatgcgtctggagagagaggagagg
gccatgtctcactcggaggctcagatcagtgtggcacagaagcggctggctcagaacgca
gacgagatggatccccagaggatgtggttccaaacgcacgacgagcgcaaaaaagaccgc
atgaccaaagcgctggctgactttgacttggccctgagaggaaaaaagaagagagagaag
ttcatcaaggaggggaaaaagaaagagttatcgtctgaggatagagcagagtttgaggtc
ctcaagtcccagatgtatgctgagcgatcagccaagagggaccggaaacccaaacgagcc
agagccatgccagaggacgagcctgtccagaaaggtgcgaaacagaaagctggtaaacca
gccaagaagtctgtatttgacaaagaacttacaaacaccagtaagaaagcactcaagcag
tacagagctggaccctcctttgaggataagaagaggcttggaattccaacgaacaagaaa
cgaggcggtggcttcaagtccaaggccaagtttaggagaaagtaa
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