Oncorhynchus kisutch (coho salmon): 109891545
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Entry
109891545 CDS
T09179
Name
(RefSeq) liprin-alpha-4-like
KO
K26226
liprin-alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109891545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109891545
Membrane trafficking [BR:
oki04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109891545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
109891545
NCBI-ProteinID:
XP_031679760
Ensembl:
ENSOKIG00005014172
LinkDB
All DBs
Position
LG5:43671249..43779984
Genome browser
AA seq
1205 aa
AA seq
DB search
MMCEVMPTITEGDSGGPPRGGGAQNGSDPEANFEQLMVNMLDERDKLLESLRETQETLIQ
SQTKLQGALHERDVLQRQIYAALPQEFATLTKELNVCREQLLEKEEEISELKAERNNTRL
LLEHLECLVSRHERSLRMTVVKRQAPPPSGVSSEVEVLKALKSLFEHHKALDEKVRERLR
VALERVTTLEGQLSATTQEVCVCLCVCVLTCHLLMPSVCVCVTLQRLPNGSIDAHDDGSR
SVELQELLDRTNHELAQSRERSGTLSTRVAELEAELANTRRDLSRSEELSVKQQREQREG
LAQREDMEERITTLEKRYLAAQRETTHIHDLNDKLENELVTKDSLHRQSEEKVRQLQELL
ELAEQRLAQTMRKAETLPEVEAELAQRVAALTKAEERHGNVEERLRQLESQLEEKNQELS
RARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEDKNSLIQDLENSQKQLE
EFHHTRERLIGEIEKLRNEIDHLKRRSGVFGDGSHPRSHMGSASDLRFSVVEGQDGHYSS
AVIRRAQKGRLAALRNEPNKVCAVFEQEYSSLRGSVSHLLGSDVEAESDLDDDVSSVLLS
PSGQSDAQTLALMLQEQLDAINEEIRMIQVERESADLRADEIESRVNSGSMDGLNVTLRP
RTMPSSATAQSLASSSSPPTSGRSTPKHNTHNASHQLGIMTLPSDLRKHRRKIASPVEAR
EDKATIKCETSPPSSPRSLRLETNFAQLTGSLEDGRGGKAKKGIKSSIGRLFGKSKEKGR
MEGGGTLGREGQPLPALMPGVDFEMSIGDTMTLGKLGTQAERDRRMKKKHELLEEARRRG
LPFAQWDGPTVVSWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRL
KLRLAIQEMVSLTSPSAPLTSRTSSGNVWLTHEEMENLASSTKAENEEGSWAQTLAYGDM
NHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRTHLKMVDSFHRASLQYGIM
CLKRLNYDRKDLDRRREESMHDMKDALVWTNEQVVHWVQSIGLKDYNTNLMESGVHGALI
ALDETFDYSSLALILQIPMQNTQARQVLEREFNNVLALGTDRRLEESGDDKTFRRSPSWR
KRFRAREGGGGMGMMAGSMETLPAGFRMPSMSMPPPSMALVPRKQLQPEVYSHDLYGHML
AAFRE
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgccaacgatcaccgagggggactcggggggtcctccccggggt
ggaggggctcagaacggctcggacccggaagccaacttcgaacaactgatggtcaacatg
ctggacgagagagacaagctgctggagtccctgcgcgagacccaggagacactcatccaa
tcacagaccaagctgcagggtgcgctgcatgaaagggatgtgctccagcgtcagatctac
gccgctctacctcaggagtttgccactctgaccaaggagctgaacgtgtgtcgggaacag
ctgctggagaaagaagaggagatatctgaactgaaggctgagaggaacaacaccaggctt
ctcttggaacacctggagtgtctggtgtctcgtcacgagcgcagtctgaggatgaccgtg
gtgaagagacaagctcctcctccctctggggtctccagcgaggtggaggtcctcaaggcc
ctcaagtccctgttcgaacaccacaaagccctggatgagaaggtgcgtgagaggcttcgg
gtggctcttgagagagtgactacactagagggacagttatcagccacaactcaggaggtg
tgtgtgtgtttgtgtgtgtgtgtcctcacctgccatctgctgatgccctcagtgtgtgtg
tgtgtgacccttcagaggctacctaacggttccatagacgcccacgacgatggcagcagg
tcagtggagctgcaggagcttctggatcggaccaatcatgagctggctcagagccgtgag
cgttcgggcacgctcagtacacgagtggcagagctggaggcggagctagccaacactcgc
cgagacctgagtcgcagcgaggagctgtcagtcaaacaacagagggaacagagagagggg
ctggcgcagagggaggatatggaggagcggattacaacgttagagaaacgttacctggcc
gctcagagggaaaccacccacatccacgacctcaacgacaaactggagaacgaactggtt
accaaggactctctgcaccgacagagtgaggagaaggtgcgccagctgcaggagctgtta
gagttggcagagcagaggctggctcagaccatgaggaaggctgagacactaccagaggtg
gaggcagagttggcacagagggtggcagccctcaccaaggccgaggagcgacatggcaat
gttgaggagcgactcagacagctggagtcacaactggaggagaagaaccaggaactgagc
agggcacgtcagagagagaagatgaatgaagaacacaacaagcgtttgtctgacacagta
gaccgtctgctcactgagtctaacgagagactgcagcttcaccttaaagaacgcatggca
gcactggaggacaagaactccctgattcaggatctggagaactcccagaaacagctggag
gagttccaccacaccagggagcgtctgattggtgagattgagaagctgcggaatgagatc
gaccacttgaaacgccggagtggagtgtttggagatggatcacacccacggtctcacatg
ggcagtgccagtgacctgcgtttctcagtggtagaagggcaggatgggcactacagctct
gctgtcatcagacgggcacagaagggccgcctggcagcgctacgcaacgaacccaacaag
gtgtgtgcggtgtttgagcaggaatactcgtctctacgtggcagtgtcagtcacctcctg
ggcagtgacgtggaggctgagtcagacctagatgatgatgttagctccgtcctcctgtca
cccagcggccaatcagatgcacagactctggctctgatgttgcaggagcagctggatgcc
atcaacgaggagatcaggatgatccaggtggagagggagtctgctgacctcagggcagat
gagatagagtctcgtgtgaacagtggtagcatggacggactcaacgttacactccgcccc
cgaaccatgcccagctcagccactgcccagtccctggcttcctcctcgtcccctcccacc
agcggacgctctacccccaaacacaacacccacaacgccagccaccagctgggaatcatg
accctgcctagcgacttaaggaaacaccgtagaaaaatagcatctccagtggaagctcgt
gaggacaaggctactatcaagtgtgagacgtctcccccctcctctccccgcagtctgaga
ctggagaccaacttcgcccagctcactggcagtctggaggacggacgagggggtaaggcg
aagaagggcatcaagtcatctataggtcgtctgtttgggaagagcaaggagaagggcagg
atggagggaggagggacactggggagggagggacagcctctgcctgccctgatgccggga
gtagactttgagatgagcatcggagacaccatgactctgggcaagctgggcacgcaggca
gagagagaccgcaggatgaagaagaaacatgagctgctagaggaggccaggaggagagga
ctgcccttcgctcagtgggatggaccaactgtggtctcctggctagagttgtgggtgggg
atgcccgcctggtacgtggcagcgtgtcgtgccaacgtgaagagcggtgccatcatgtcg
gccctgtcggacacagagatccagagggagattggcatcagtaaccccctgcaccgcctc
aaactgagactggccatccaggagatggtgtccctcaccagtccctctgccccgctcacc
tctagaacgtcctccggaaatgtgtggttaacccatgaagagatggagaacctggcttcc
tccactaaagcggagaatgaggagggcagctgggctcagactctggcatacggggatatg
aaccatgagtggatcggtaatgagtggctgcccagcctgggtctgcctcagtaccgctcc
tacttcatggagtgtctggtggacgcccgcatgctggaccacctcaccaagaaagacctc
cgcacccacctcaagatggttgacagcttccacagggccagtctgcagtatgggattatg
tgcttgaagagactcaattacgacaggaaagacctggaccgtcgtagagaggagagcatg
cacgacatgaaagatgcgttagtgtggaccaatgagcaggtagtgcactgggtccagagt
ataggtctgaaggactacaataccaacctgatggagagtggagtccacggggctctcatt
gctctggatgagaccttcgactacagcagcctggctctcatactgcagatccccatgcag
aacacgcaggctcggcaggttctggagagagagttcaacaacgtcctggccctgggtact
gaccgcagactggaggagagtggggatgataagacgttccgccgctctccatcgtggcgt
aagcgtttccgagcgcgggagggaggagggggaatgggcatgatggcgggctccatggaa
acactgcccgctgggttccgtatgccctccatgtccatgcccccaccgtccatggccctg
gtgcccaggaaacagctgcaaccagaagtttattcccatgacctgtatggacacatgctt
gcggcctttcgagagtga
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