Oncorhynchus kisutch (coho salmon): 109891717
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Entry
109891717 CDS
T09179
Name
(RefSeq) LOW QUALITY PROTEIN: tetratricopeptide repeat protein 28-like
KO
K24936
tetratricopeptide repeat protein 28
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oki03037
]
109891717
Cilium and associated proteins [BR:
oki03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
109891717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TPR_10
TPR_MalT
TPR_16
TPR_11
RPN7
TPR_17
TPR_NPHP3
PUB
TPR_9
TPR_19
TPR_14
Motif
Other DBs
NCBI-GeneID:
109891717
NCBI-ProteinID:
XP_031682187
Ensembl:
ENSOKIG00005002286
LinkDB
All DBs
Position
LG6:18019323..18148954
Genome browser
AA seq
2600 aa
AA seq
DB search
MEKHRPKKERFSLFGSRSSGRSTNPPSSSSSSSTSAPPIPPTLCKTDPHPSIPPSLRKTD
PHPSIAPSLRKTDPHPSIAPSIPPGPPILSKTEFLEAVRCSNQACQRGQYSQAVQLYGKA
LSADPQNCILYSNRSAAHLRLGQYQTALDDALKARLLNPKWPKAYFRQGVALQYLGRHAD
ALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRDSLEPTYQQLQRMKLDKSPFVVVCVIGQ
ELLTAGYHGASVVVLEAGLKIGTCSLKLRGSVFSALSSAYWSLGNAEKSTGHMQQDLEVA
KTLGDQSGECRAHGNLGSAYFSKGNYREALTNHRHQLVLAMKLKDREAASSALSSLGHVY
TAIADYPNALASHKQCVLLAQQTQCPLSEARQLGNMGAVYTALGDFTNAVLCHQQHLDIA
KTLGNGREEARAYSNLGSAHHSQRDFDKAVSYHTLVLQLAQELEDRTIQMRAYAGLGHAA
RCMQDLERAGQYHQQQLDIAEELQDRAAKGRASSNLGIIHQMKGEYDAALKLHNAHLCLV
QELGDYAAQGRAYGNMGNAFNALGMYDQAVRYHRQELHISLEVNDRPSQASTHGNLAVAY
QALGAHDRALQHYLHHLTIARELRDTQSTARALGNLGNFHCCRGEYVQAVPYYQQYLTLS
PQLQDLEEEGKVCHNLAYTHYCLGQYREAVRYYEQDLALAKDLGDKLSQAKAYCNLGLAY
KALGEYNKAEDCQRYLLSLAQALNNTQAVFRALGNLGDVCVCRVDVAGAVRFYQQQLTLA
QEVKGHKMEADAYSALGSAHRLLRQYDLALSFHQQELSARTALDDQQGQCGALGRLAAVH
MALTDYATAFQCYQAQLTLAQGLRDARVEAQVQGNMGIAKMNMGVLEEAIGYFEQQLAML
EQLSGAECVLDRGRAYGNLADCYDSLGDFEEAIKYSEMFLTVAQSLNHVQDQERAYRGLG
NAHRSLGSLQQALVCFEKRLVVAHELGGSGGGSGGGGKAQAYGELGDLHSQLGNYEQALS
CLEHQLNIACTSGDRALEGEASAALGAVYQLMGENEAALQWHQSALEIAEETGSGRSQGM
AYGNMGLTYEALGNYEKAVDCQEQHLSVAAQNNDLTAKTLAYGSLGRTHHALQNYTQAVM
YLQEGLRLAEQCGRREEEAKIRHRLGLSLWASSNLEEAQHQLYRASALFESIRHEAQLSS
DYRLSLFDLQTSSYQALQRVLVSLGHYDEALAVAERGRTRAFADLLVERQQGHQPLTSDP
YTPTPDPYSPVTIEHILDTVNSQKSLVLYFSLAAGYLYSWLLAPGTGIVKFHEVYLGEGG
AELQAAEIQGGGVSGCQTLEQHITAAREALGVDTYYSSSETENEAGDLLEQQLEERLTSA
SDPTDCLHSQVSRNNVFSRSGQSLSSLVSSTVSPVRETSLLCRPAPLTKPPXRALHHLLI
APMEEVLMPGSGAVGRHRQLVLVLEGELYLVPFALLKGSSSNEYLYERFNLLAVPSIGSL
GAAAKSHPRHRAPFLYSGGGSMTAVVGAPRLPSRVMERWLWGPLPSAHDEALRLGELLGC
QPLTGTQATKERVLAAMSQAECVHFATHVSWKLAALVLSPSQDPGVGSETRPKESAPCGG
SLLRESGDVGASTELREERSEDGGSVCDTESVCDAESVCDSPPLQDFLLTAADILDLRLP
VKLVVLGSYQECVSRVTSDGVVGLSRAFLTAGVQCVCVSLWPVPMAASKVFTHSFYTALL
NGTKASAALSEAMKTLQSSTHFSHPSNWAGFMLIGCDVKLNSPSSLIGQALAEILQYPER
ARDALRVLLHLVEKSLQRIQSHQSNAMYTSQQSVENKVGGVPGWQALLSAVGFRLDCSGT
GSGLPAAVFFPTADPGDRLQLCSTTLQSLLGLPHAAFQALCKLVTAAETGDQLINKAVKY
MVGMLHQVLFQQQSCDKELEFSLAPIQVSISVQLWRLPGCHEFLAALGFDLCEAGQEEVL
LKTGKQASRRTMHFALQSLLALFDSTELPKRLSLDSSSSLESLSSSQCASHSLPLSLPLN
LPQPPFSPPLGGADGLSCDAISLYSLSSLTSSLSFLSRPEPAGIDVISQRSRQQELERHR
GGAGLFASHRHTGGMSRNRLTNHRGGGGTEGEEQEEYEGFSIISSEPLGGGGGRECDTLP
LPGGYRHLRGAGRGDVVGRGYPVSVSSKGSVSTPTSPLKVPLPPLAIPPSPNTQAKSQGS
QSVSKGQLVSTEAVLSESDQSSTETDSTVKSQEDKPPPTPLDPQELASRILSETQSHMQA
VESLQRGRTGRAGNGGGEEGLRGPERRPSCTSARLTPAAGGLGFRSSETSAFSRPSSRAS
QPPSRSSSLQKISSGYNSPTVSSRSPSLSFSHPNPSPSRTPDPHIQVQLRHKYPSSPYTP
HISHSPNSISISPSSGHPSSVGSFPSLAASPVLSLAPSPALSFSSTGSTSARSSPAETPD
LGRLKRAGLVDERVQAIHNLKTFWSNATQRQEVPGPGRMLRGGGKKMSTVQKDVLGLLHL
SPRHGSTNQNQDTEGPQSPTNPPDGHKKLVPKPPVVLPPHTATDSFLGGSPGAPPHPVRL
PSGKGFKFPSPGKFFPSSKC
NT seq
7803 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcatcgaccgaagaaagaaaggttctctctctttggctctcgctcttctggc
cgaagcaccaaccctccctcttcctcctcttcatcctctacctctgctccccccatccct
cccactctctgcaagacagaccctcatccctccatccctccctctctccgtaagacagac
cctcatccctccatcgctccctctctccgtaagacagaccctcatccctccatcgctccc
tccatccctcctggtcctcctatcctttctaagacagagtttttggaagcagtgcgttgc
agtaaccaggcgtgccagcgggggcagtacagccaggcggtgcagctctatgggaaggcc
ctgtctgcagaccctcagaactgcatcctgtacagtaaccgctcagcggcccatctccgc
cttggacagtaccagaccgccctggacgacgccctcaaagcccgcctgctcaaccccaaa
tggccaaaggcgtacttccgtcagggcgtggccctgcagtaccttggtcgccatgccgac
gcccttgcagcatttgcctctggtctggcgcaggaccccaagagtctccaactattggtg
ggcatggtcgaggctgccatgaagtccccactacgagactctctagaacccacctaccag
cagctgcagaggatgaagctggacaagagtccgtttgtggtggtgtgtgtgattggtcag
gagctgctgaccgctggttaccatggagcctcggttgtggttctggaggcagggctaaag
atcggcacatgctctctgaagctccgaggttcagtgttctctgctctcagctcagcctac
tggtctctaggcaacgcagagaagagcacaggacacatgcagcaagacctggaggtcgcc
aagactctaggtgaccaatcaggcgagtgccgggctcatgggaacctagggtccgcctac
ttctccaagggcaactacagggaggctttaaccaatcacagacatcagctggtcctcgcc
atgaaactcaaggacagagaggctgcgtccagtgcactgagcagccttggccatgtgtac
acagcgatagcggactaccctaacgccctggccagccataaacagtgtgtgctgttggca
cagcagacgcaatgcccgctgtcagaggctcgccagctgggcaacatgggagctgtctac
accgcactgggagacttcaccaatgctgtgctgtgtcaccagcaacacctggacatagct
aagaccctaggtaatgggcgtgaggaggcgcgggcgtacagtaacctgggcagtgcccac
cacagccagagagactttgacaaggctgtgtcctaccacacactggtgctgcagctggct
caggagctggaggacaggaccatacagatgagggcttacgccggcctgggacacgctgct
cgctgcatgcaggacttggagagggcaggccagtaccaccagcagcagctggacatagca
gaggagctgcaggacagagctgcaaagggacgcgcttcgtccaacctgggtataatccat
cagatgaagggggagtacgatgcagcgttgaagctccacaatgcccacctgtgtttggtc
caggagctgggggactatgctgctcagggcagggcctatgggaacatgggcaatgccttc
aacgctctggggatgtacgaccaggctgtgcgctaccaccggcaggagctgcacatatca
ctagaggtgaatgaccggccctcccaggcctctacccatggtaacctggctgtagcctat
caggctctgggcgctcacgaccgtgctctccagcactacctgcaccacctgaccatcgca
cgtgaactacgagacacacagagcacggccagggcactaggtaacctgggtaacttccac
tgctgtagaggggagtatgtccaggcggttccctactaccagcagtacctgaccctgtca
ccccagctacaggacctggaggaagagggcaaggtctgccacaacctggcctacacacac
tactgcctgggacagtacagagaggccgtcaggtattatgaacaggacctggccctggct
aaagacctgggggataagttgtcccaggctaaagcctactgtaacctgggtctggcctac
aaagccctgggggaatacaacaaggctgaggactgtcagagatacctgctgtccctggct
caggctctcaacaacacacaggctgtgttccgtgccctggggaacctgggggatgtgtgt
gtgtgtcgggttgacgtggccggggcggtgaggttctaccagcagcagctcaccctggct
caggaggtcaaaggccacaaaatggaggccgacgcatactcagcgctaggctccgcccac
agactcctccgtcagtacgacctggcgctgtccttccaccagcaggagctgtctgcccgc
accgctctagacgaccaacaggggcagtgtggtgctctgggccgcctggcagccgtccac
atggccctgacggactacgccacagccttccagtgctaccaggcccagctcaccctggca
cagggcctcagagacgcccgcgtggaggcacaggtccagggcaacatgggcatcgccaag
atgaacatgggcgtcctggaggaggccattgggtattttgagcagcagttggccatgctg
gagcagctgagtggggctgagtgtgtgctggacagaggcagggcctacgggaacctagca
gactgttatgactctctgggtgactttgaggaagctataaagtacagtgagatgtttcta
accgtggctcagagtctcaaccatgttcaggaccaagagagagcctacaggggactgggc
aacgcacacagatctctaggtagtctccagcaggctttggtttgttttgagaagagactg
gtggtggcccatgagctgggtggatcaggaggcggatcaggaggaggggggaaggcccag
gcctatggggagctgggagacctacacagccagctgggaaattatgagcaagccctgtcc
tgcctggagcatcagctcaacatcgcctgcacctcaggggaccgagcactagagggcgaa
gcgagcgcggcgctgggtgcagtgtaccagctgatgggagagaacgaggcagctctgcag
tggcaccagagcgcattagagattgcggaggagactggaagtgggaggagtcagggaatg
gcctatgggaacatgggactgacttatgaggcgctgggaaactacgaaaaggctgtggac
tgtcaggagcagcacctgagtgtggcggcgcagaataatgacctcacagccaagacactg
gcatatggcagcctggggaggacacaccatgcgctacagaactacacacaggctgtcatg
tacctgcaagaaggtctgcgtctagcggagcagtgtgggaggagagaggaggaggctaag
atccgtcaccgtctgggcctgtcactgtgggccagcagcaacctggaagaggcccagcac
cagctgtaccgagcgtctgcgttgtttgagtcgattcgtcacgaggcccagctcagctca
gactacagactgtctctgttcgacttgcagacgtcatcataccaggctctccagagggtc
ctcgtcagcctgggtcattatgacgaggccctagcagtggcagagcggggtcggacccgg
gccttcgctgacctcctggtggagcgacagcaaggtcaccaacccctgacctctgaccct
tataccccgacccctgacccttactccccggtaaccatagaacacatcctggatacggtc
aacagtcagaagtcactggtgctgtacttctctctggctgcagggtacctctacagctgg
ctactggcaccaggcacaggtatagtgaagttccatgaggtgtacctgggtgagggagga
gccgagctgcaggccgcagagatccaggggggaggagttagtggctgtcagactctggag
cagcacatcactgcagctagagaggctctgggagttgacacctactacagcagcagtgag
acggagaatgaagcaggtgatctgttagaacaacagcttgaggaacgactgacctcagcc
agcgaccccactgactgcctacacagtcaggtgtccagaaacaacgtcttcagcagaagt
ggtcagagtttgtccagtctggtcagttctacagtgtctccagtgagagagacctctcta
ctctgtagacccgcccccctcaccaaaccccccntacgagcccttcaccacctgctcatt
gcacctatggaggaggtgctgatgcctggcagtggtgcagttggcagacacagacagttg
gtgttggtgttagagggagagctgtacctggttcccttcgctctgctcaaaggtagctct
tctaatgagtacctgtatgagaggttcaaccttctagctgtcccatctatagggagcctg
ggggctgcagccaagtcccaccctcgtcacagagctcctttcctctacagcggtgggggt
tctatgaccgcagtagtgggggctccacgcctgccctccagggtgatggagcgttggctg
tgggggccgctgccctctgcccacgacgaggccctccgcctgggggaactgctgggttgc
cagcccctcactggtacacaggccaccaaggagcgtgtgctagcagccatgagccaggca
gagtgtgttcactttgctactcatgtctcctggaagctggcggccctggttctctccccc
agccaggatccaggggtaggctcagaaacacggcccaaggagagtgcaccatgtggggga
tcacttttacgtgagagtggggatgtgggagcaagtactgagctacgggaggagaggagt
gaggatggaggaagtgtgtgtgacacagagagtgtgtgtgacgcagagagtgtgtgtgac
agtccaccgctacaggactttctgctcactgcggccgacatactggacctgagactgcct
gtgaaactggtggttctggggtcgtaccaggagtgtgtcagcagagtgacctcagacggt
gtggtggggctgtcccgtgccttcctgacagcgggtgtgcagtgtgtgtgtgtgtcgctg
tggcccgttcccatggcagcatccaaggtgttcacgcacagcttctacacggcactactg
aacgggaccaaggccagtgcagctctctctgaggccatgaagactctacagagcagcaca
catttctcacacccgtctaactgggcgggcttcatgttgattggctgtgatgtgaagctg
aacagtccctcgtctctgattggccaggccctggcagagatcctccaatatcctgagaga
gctagagatgccctgagagttctactgcacctggttgagaagtctctccagcgtatacag
agtcatcagagtaacgccatgtacacctcgcagcagagcgtggagaataaggttggtggg
gtcccgggatggcaggccctgctgtcagctgtggggttccggttagactgttctggtacc
ggcagtggtctccccgctgctgtcttcttccctacggctgaccctggagatcggctccag
ctctgcagcaccaccctgcagtcactactcggtctgcctcatgcagccttccaggctctc
tgtaaactggtcactgctgctgagactggagaccagctcatcaacaaggctgttaaatat
atggtgggaatgcttcaccaggtattgtttcagcagcagtcatgtgacaaggagctggag
ttctcattggctcccatccaggtgtccattagtgtccagctgtggagacttcctggttgt
catgagttcctggctgcgctgggttttgacctgtgtgaggcaggacaggaggaggtgcta
ttgaagactggtaaacaggctagcagacggaccatgcactttgctctgcagtctctacta
gcactgtttgactctacggagctgcccaaacgcctcagcctggacagctcttcctctctt
gagtctctctcctcttcccagtgtgcctcccactccctccctctctccctccccctcaac
cttccccagcctcccttctctcctccacttggcggcgcagacggtctctcctgtgacgcc
atctccctctacagcctcagctcactcacttcctctctcagcttcctgtctcgccccgaa
cccgcaggaattgatgtcatcagccagcgctcacggcaacaggaactggagcggcaccgc
ggaggagcggggttattcgcctcgcaccgacacacaggaggcatgtcgagaaacagatta
acaaatcacagaggaggaggagggacagagggggaggaacaggaggagtatgaaggattc
tccatcatcagcagtgaacctctggggggaggaggggggagggagtgtgacaccttaccc
ctccctgggggatacagacaccttagaggagcggggaggggagacgtggtggggagaggg
taccccgtctcagtctcctccaaggggagtgtcagcactcccacctcaccgctcaaagtc
cccctgccgcccctggccataccccccagccctaacacacaagctaagtcccagggctct
cagagcgtgtctaaaggtcagctggtcagtacagaggcggtgctctctgagtctgaccag
tccagtacagagacagacagcaccgtcaagtcccaggaagacaagcctccccccacccct
ctggacccccaggaactggccagcaggatcctgtcagagacccaaagccacatgcaggct
gtggagagcctccagagggggaggacaggaagggcaggcaacggaggaggggaggagggg
ttaaggggaccagaacgtaggccctcctgcacctcagcccgtctgacccccgccgcaggg
ggtttgggcttccgttcgtctgagaccagcgctttcagcagacccagtagtagagccagc
cagccaccctctcgttcctcatccttacagaagatcagctccggctacaacagcccgacc
gtatcctcccgctctccctccctctctttctctcaccccaacccctcgccctccagaacc
ccagacccccacatccaggtgcagctcagacataaataccctagctccccttataccccc
cacatctcacactcccccaatagcatctccatctcccccagctcaggccacccttcctca
gtcggaagcttcccatccttggctgcatccccagtcctctccctggccccttcccctgcc
ctctctttctcctccacaggttccacttctgcccgctccagcccggccgaaaccccagac
ctgggccggttgaaacgggcaggccttgtggacgagagggtacaggccatccacaacctg
aagaccttctggtccaacgccacccagaggcaggaggttcccggcccaggcaggatgctc
cgaggtggtgggaagaagatgagcacggtccagaaagatgtcctggggctccttcacctc
tctccaagacatggatccaccaaccagaaccaggacactgaagggccccagagccctacc
aacccacctgatggacacaagaagctggttccaaaaccgccagtggtgcttcctcctcat
actgctactgactcctttttgggaggtagtcccggagcacccccacaccctgtcagactg
ccctcggggaaaggcttcaagttcccctcgcctgggaaattcttcccctcctccaaatgc
tga
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integrated database retrieval system
