Oncorhynchus kisutch (coho salmon): 109891731
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Entry
109891731 CDS
T09179
Name
(RefSeq) transcription factor RFX3-like isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109891731
Transcription factors [BR:
oki03000
]
Eukaryotic type
Other basic domains
RF-X
109891731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
RFX1_trans_act
ThermoDBP-RP_arch
HisKA
Motif
Other DBs
NCBI-GeneID:
109891731
NCBI-ProteinID:
XP_031682233
Ensembl:
ENSOKIG00005000211
LinkDB
All DBs
Position
LG6:complement(20613418..20662564)
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AA seq
813 aa
AA seq
DB search
MQTPEAGAESASTVHTAVPVQPAGSAQQVSSQAQTVQQVQHVYPAQQVQYVEENSGVYTN
GNIRTYSYSEPQLYSQNSGGSYFDTQGSSSQVSTVVSSHGMANNGGGNGGLTMGLAGGQI
ISSSGAYLIGGNTMDNSAPHPAAQTTRASPATVSIEMAIETLQKTEGLSSQRSSLLNSHL
QWLLDNYETAEGVSLPRSTLYNHYLRHCQEQKLDPVNAASFGKLIRSIFMGLRTRRLGTR
GNSKYHYYGIRLKPDSPLNRLQEDMQYMALRQQPVQQKQRFKPMQKVDGVSGENFSGGGQ
HTPSAAEQTVIAQSQHHQQYLDTSRALPDFVELDLGETNGDNVSPDDIKALQSLYREHCE
AILDVVVNLQFSLIEKLWQTFWRYSPSDSVEGATITENSGVSEIEVNLIQYMRVCVTLEP
GLHSGESEVNLIQYMRVCVTLEPGLHSGVSEIEGRLPCCRLLVLCRNEAVLKWMSSCDHL
MYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLNNAMNTIPQRMIQTKVAAVSAFAQ
TLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQCEEGVVQRLEQ
DFKATLQQQSSLEQWAAWLDNVVTQVLQPFEDRPSFPRAARQFLLKWSFYSSMVIRDLTL
RSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGQTPISVMGEFDDLNAMSPANIDKDEVS
EMDSDLEEDMEESGEPLAKREKAEVEHEHQVIQVIQVGALEDGSNPVVGVLQPGILNSLP
QPPQNHAEHILTTSAATTTIRHCSATGNTYASV
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgcagacccctgaggcaggcgctgaatccgcctccactgtccacaccgctgtgcctgtg
cagcctgcaggctccgcccagcaggtgtcctctcaggcccagactgttcaacaggttcag
catgtatacccagcacaacaggtgcagtacgtggaggagaacagtggcgtctataccaac
gggaacatacggacatactcgtactccgagccccagctgtacagccagaacagtggaggg
agctactttgacacgcagggcagctcatcccaggtgtccacggtggtgtcatcccatggc
atggccaacaacggaggggggaacggggggctgaccatgggtctggctggggggcagatc
atcagcagctctggggcctacctcatcgggggcaacaccatggataactctgccccccac
ccagcagcccagaccacccgagcctccccggccactgtgagtattgaaatggcgattgag
acgctccaaaagactgaaggtttatccagtcagagaagctcactactcaacagccatctg
cagtggctcctggataactatgagacagcggagggggtgagtctgcctcgctccaccctc
tacaaccactacctgcgccactgccaggagcagaagttggacccggtcaacgctgcttcc
tttggcaaactcatccgctccatcttcatggggctccgcacgcgtcgcctgggcacacga
gggaactcgaagtaccactactatgggatccggttgaagccggactctcctctcaacaga
ctgcaggaggacatgcagtacatggccctcagacagcagcctgtccaacagaaacagagg
tttaagccgatgcagaaggttgatggtgtatctggggagaacttctcaggcggaggccag
cacacccccagtgcagcggagcagactgtcatcgcacagagccagcaccaccagcagtac
ctggacacatcgcgggccctgccagactttgtggagctggacctgggagagaccaacggt
gacaacgtcagcccagacgacatcaaagctctccagtcactctacagagagcactgtgag
gccattctggatgtggtggtcaacctccagttcagtctaatagagaagctgtggcagact
ttctggcgctattctccttctgactcagtggagggcgccaccatcacagaaaacagtggt
gtgagtgagattgaggtgaatctgatccagtatatgagagtatgtgtgactcttgaacct
ggtctccacagtggtgagagtgaggtgaatctgatccagtatatgagagtatgtgtaact
cttgaacctggtctccacagtggtgtgagtgagattgagggccgtctgccctgctgcaga
ctgctggtgctctgtaggaacgaagctgtgctcaagtggatgagttcctgtgaccacctg
atgtaccaggccctagtggagatcctcatccctgatgtcctcagacccatccccagtgcc
ttgactcaagccatccgcaactttgccaaaagcctggaaggctggctcaacaatgccatg
aacaccattccacagagaatgatccagaccaaggttgccgctgttagtgcctttgctcag
acgctgcgtcgctacactagtctgaaccacctggcccaggcagcacgcgccgtgctgcag
aacacctcccagatcaatcagatgctcagtgatctcaaccgcgtcgacttcgccaacgtg
caggagcaggcgtcgtgggtgtgtcagtgtgaggagggtgtggttcagaggttagagcag
gacttcaaggccactctgcagcagcagagctctctggagcagtgggctgcctggctggac
aacgtggtcacccaggtcctacagcccttcgaggacaggcccagcttccccagggcggca
cgacagttcctgctcaagtggtccttctacagctccatggtgattcgggacctgaccctg
cgcagcgcggccagttttggctcgttccacctgatccgcctgctctacgacgagtacatg
ttctacctggtggaacaccgcgtcgcccaggcaaccggtcagacacctatcagtgtcatg
ggagaattcgatgacctcaacgccatgtcacctgctaacatagataaagacgaggtgagt
gagatggacagtgacctggaggaggacatggaggagtccggggagccgctggccaagcgg
gagaaagctgaggtggaacatgagcaccaggtgatccaggtgattcaggtgggggctctg
gaggacggcagtaaccccgtggtgggggtgctccagccgggcatcctgaactccctgccc
cagcccccccagaaccatgctgagcacatcctcaccacctccgccgccaccaccaccatc
cgccactgcagtgccaccggcaacacctacgcctccgtctga
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