Oncorhynchus kisutch (coho salmon): 109891995
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Entry
109891995 CDS
T09179
Name
(RefSeq) transcription activator BRG1-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109891995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109891995
03036 Chromosome and associated proteins [BR:
oki03036
]
109891995
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109891995
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
109891995
Chromatin remodeling factors
BAF complex
109891995
PBAF complex
109891995
GBAF(ncBAF) complex
109891995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
109891995
NCBI-ProteinID:
XP_031690416
Ensembl:
ENSOKIG00005021743
LinkDB
All DBs
Position
LG10:61698644..61718499
Genome browser
AA seq
1638 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGAMMGPSPSPGSAHSMMGPSPGPPASGHSHPQQGPS
VYPQENMHQMHKPMEGMHEKGMSDDPRYGPMKSMGMRPGGGHIGMGPPPSPMDQHSQGYP
SPLGGSEHSPSPVPANGPPPGPMMPSGPGVPMEGGDPQAMGQQNRVGVPGSSGGSGPGGV
GPGGPTPFNQNQLHQLRAQIMAYKMLTRSQPLPDHLQMAVQGKRPMPGMQQQPGMPNMPP
SSGPGAGPGQPPANYNRPHGMVGPNMPPPGPSGVPPGMQGQPTNGPPKQWPEGPMVNAAA
PSSAPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPPQPPPMVLHQKQNRITPI
QKPRGLDPVEILQEREYRLQARITHRIQELEHLPGSLAGDLRTKANIELKALRLLNFQRQ
LRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEY
LNSILQHAKDFKEYHRSITAKLQKATKAVATYHANTEREQKKENERIEKERMRRLMAEDE
EGYRKLIDQKKDKRLAYLLQQTDEYVANLTDLVRAHKADQALKDKKKKKKKKKKKKPESG
EGQPPALGPDGEPLDETSQMSDLPVKVIHVDSGKILTGLDAPRAGQLDTWLEMNPGYEVA
PRSDSEDSGSEEEEEEEVEPQPSQAPTEEKKKIPDPDTEDVSEVDVRYIIEGAKQDVDDE
YNSAEAAFARGLQSYYAVAHAVTETVDKQSTLLVNGQLKHYQIKGLEWLVSLYNNNLNGI
LADEMGLGKTIQTIGLITYLMEHKRINGPFLIIVPLSTLSNWVYEFDKWAPTVVKVSYKG
SPQARRAFLPILRSGKFNVLLTTYEYIIKDKQVLAKLRWKYMIVDEGHRMKNHHCKLTVV
LNTHYLAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCTTFEQWFNAPFAMTGEKVDL
NEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQRVLYRHMQAKGV
LLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQQIEESFSEHLGFTGGVVSGPDLY
RAAGKFELLDRILPKLMVTDHKVLLFCQMTSTMTIMEDYFGWRNFKYLRLDGTTKAEDRG
MLLKTFNDPASQYFVFLLSTRAGGLGLNLQSADTVVIFDSDWNPHQDLQAQDRAHRIGQR
NEVRVLRLCTVQSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQ
DEVGAPGGWRAGGALEEDEVPDDETVNQMIARSEEEFDQFMRMDLDRRREDARNPKRKPR
LMEDDELPTWILKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEDGN
LEDLEEEVRHKKTTRKRKRDRDDMPGPATPSSSGGGGGRSRDKDEEVKKAKKRGRPPAEK
LSPNPPSLTKKMKKVVDTVIKYKDGSNGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKI
KERIRSHKYRSLNDLEKDVMLLCSNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEKEE
ESEGEDSEEEEEEEVDEGSESESRSVKVKIKLGRKEKEGRGKGQRRRGRGSRAKPVVSDD
DSEEEQEEAGSASGSEEN
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccagacccccccatgggagggacgcctcggccgggcccctccccaggacca
gggccttctccaggagcaatgatgggccccagcccttccccgggctctgctcatagcatg
atgggacccagcccaggtcccccagcctctgggcactcccacccacaacaggggccctca
gtatatcctcaggagaatatgcatcagatgcacaaacctatggaaggcatgcatgagaag
ggcatgtctgatgaccctcgctatggaccgatgaagagcatgggcatgagaccaggtgga
ggccacattggaatgggaccccctcctagccccatggaccaacattcccaaggctacccc
tctccactggggggttctgagcactctcccagccccgtgccagccaacggccctcccccc
ggccccatgatgccctctggcccaggtgtccccatggagggaggtgacccccaggccatg
ggccagcagaaccgcgttggggtaccaggttcgagtggtggttctgggccaggcggtgtt
gggccaggtggacccacccccttcaaccaaaaccagctacaccagctcagggcccagatc
atggcctacaagatgctgactcgcagccagcccctgccagaccacctgcagatggccgtg
cagggcaagaggcccatgccagggatgcagcagcagccagggatgcccaacatgccccct
tcctctgggcctggagcggggcctggacagccaccagcaaactacaacagacctcatgga
atggtaggcccaaacatgcctcctccaggaccctcaggtgttccccctggtatgcagggc
cagcccaccaatggaccccctaaacaatggcccgaagggcccatggtgaatgctgctgct
ccatccagtgccccccagaagctgattccccctcagcccactgggagaccctcccctgct
cccccctccgtgccccctgctgcctccccggtcatgccccctcagacccagtcacccggg
cagcccccccagcccccacccatggtgctgcaccagaaacagaaccgcatcacacccatc
cagaagccccgtggcctggacccagtagagatcctccaggagagagagtacaggctgcag
gctcgtatcacccaccgtatccaggagctggagcatctaccagggtctctggccggagac
ctgcgtaccaaagccaacatcgagctaaaggccctgaggctgctaaatttccagagacag
ctgcgtcaggaggtagtggtgtgtatgcgtcgtgacacggccctggagacggccctcaac
gctaaggcctacaagcgcagcaagcggcagtccctccgtgaggcccgcatcacagagaaa
ctggagaagcaacagaagattgaacaggagcgcaaacgacgccagaaacaccaggaatac
cttaacagcatcctgcagcatgctaaagacttcaaggagtaccaccgctccatcacagcc
aagctccagaaggccaccaaagctgtggccacgtaccacgccaacactgagcgcgagcag
aagaaggagaacgagcgcattgagaaggagagaatgaggaggctgatggcggaagatgag
gagggctaccgtaagctgattgaccagaagaaagacaagcgcctggcctacctgctgcag
cagacagacgagtacgtggccaacctcaccgatctggtcagagcccacaaggctgatcag
gccctcaaggataagaagaagaagaaaaagaagaagaagaagaagaagccagagagtggg
gagggccagcctcctgccctgggacccgacggagagcctctggatgagaccagtcagatg
agtgacctgcctgtgaaggtgatccatgtagatagtgggaagatcctgacggggctggat
gcgccccgggctggccagctggacacctggctggagatgaaccctgggtatgaagtggcc
cctcgttcagacagtgaggacagtggctcagaggaagaggaggaggaagaggtggagccc
cagccctcccaggctcccactgaggagaaaaagaagatcccagaccccgacacagaggac
gtgtcggaggtcgacgtccgctacatcatcgagggagccaagcaggatgtggatgatgag
tataacagtgccgaggcagcgttcgcccgaggcctgcagtcatactatgctgtggcccac
gccgtcactgagacggtggacaaacagtccacgctgctggtcaacgggcagctcaaacat
taccagatcaagggcttggagtggctggtgtctctgtacaacaacaacctgaatgggatc
ctggctgatgagatgggtctgggcaagaccatccagaccatcggcctcatcacctacctc
atggagcacaagcgcatcaacggccccttcctcatcatcgtgcccctctcaactctgtcc
aactgggtgtatgagtttgataagtgggctccaacggtggtgaaagtctcttacaaaggc
tccccacaggctcgccgggcattcctccccatcctgcgcagcggcaagttcaacgtactg
ctcaccacctacgagtacatcatcaaagacaagcaagtgctggctaagctgcgatggaag
tacatgatagtggacgagggccaccgtatgaaaaaccaccactgtaagctgactgtggtt
ctgaacacccactacctggccccgcggcgtctgctgctgaccggcaccccgctgcagaac
aagctgccggagctctgggccctgctcaacttcctgctgccgactatcttcaagtcctgc
actacctttgagcagtggttcaacgcccccttcgccatgaccggagagaaggtggatctg
aacgaggaagagaccatcctgattattcgtcgtttgcacaaagtactccgccccttcctg
ctgcgcagactgaaaaaggaagtggagtcccagctgcctgagaaggtggagtatgtgatc
aagtgtgacatgtcggccctgcagagagtgctgtacagacacatgcaggctaagggtgtg
ctgctcaccgacggctctgagaaagacaagaagggtaaaggaggcaccaagaccctgatg
aacaccatcatgcagctgaggaagatctgtaaccatccctacatgttccagcagatcgag
gagtccttctctgagcatttgggattcactggaggcgtagtgtctggacctgacctgtac
cgcgccgctgggaagtttgagctgctagaccgtatcctgcccaagctgatggtcaccgac
cacaaggtcctgctcttctgtcagatgacttccaccatgaccatcatggaggactacttt
ggctggcgcaactttaagtacctgcgtctggacggaaccactaaggctgaggatcgtggg
atgcttttgaagaccttcaatgaccccgcctctcagtactttgtgttcctgctcagcacc
agggccggcgggctcggcctcaaccttcagtctgctgacactgtggtcatctttgactcc
gactggaacccacatcaggatctgcaagcccaggacagagcccaccgtatcgggcagcgg
aacgaggtgcgtgtgttgcgtctctgcaccgttcaaagtgtggaggagaagatcctggcg
gcggccaagtacaagctgaacgtggaccagaaggtcatccaggccggcatgtttgaccag
aagtcgtcgagtcacgagcgccgtgccttcctgcaggccatcctggagcatgaggaacag
gacgaggtcggggccccggggggctggcgcgctgggggggcgttggaggaggacgaggtg
cctgatgatgagaccgtcaaccagatgattgccaggagcgaggaggagtttgaccagttc
atgcgtatggacctggaccggcgccgcgaggacgcccgcaaccccaagagaaagccccgt
ctgatggaggatgacgagctgcccacctggatcctgaaggatgatgccgaggtggagagg
ctcacctgtgaggaggaggaggagaagatgtttggtcgcggctctcgccagcgcaaggag
gtggactacagcgactcactcacagagaagcagtggctcaaggccatagaggacggtaat
ctggaggacctcgaggaggaggtgcgtcacaagaagacgacccggaagcgcaagcgagac
cgcgacgacatgcccggcccggccacgcccagctccagcggtggtggcggaggtcgcagc
cgtgacaaggacgaggaggtcaagaaggccaagaaacgcgggcgccctccggctgaaaaa
ctgtcccctaaccccccatccctcaccaagaagatgaagaaggtggtggacactgtcatc
aagtacaaggacggcagcaatgggcgccagctgagtgaagtcttcatccagctgccctcc
cgcaaggagctgcctgagtactatgagctcatccgcaagcctgtcgacttcaggaagatt
aaggagaggatccgcagccataagtaccgcagcctgaatgacctggagaaggatgtgatg
ctgctgtgtagtaacgctcagaccttcaacctggagggctctctgatctatgaggactcc
atcgtactgcagtcagtcttcaccagtgtcaggcagaagattgaaaaggagaaggaagag
gagagtgagggagaggacagtgaggaggaagaagaggaggaggtggacgaaggctcagag
tctgaatctcgttcagtgaaggtgaagattaagctggggaggaaggagaaggagggcaga
gggaagggccagcgccggaggggccgtggctcccgggccaaacctgtagtgagtgacgac
gacagcgaggaggaacaggaggaggcgggttcggccagcggcagtgaggagaactga
DBGET
integrated database retrieval system
