Oncorhynchus kisutch (coho salmon): 109892046
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Entry
109892046 CDS
T09179
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1-like
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
oki01100
Metabolic pathways
Module
oki_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
109892046
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oki01003
]
109892046
Enzymes [BR:
oki01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
109892046
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
109892046
Glycosyltransferases [BR:
oki01003
]
Glycan extension
O-Glycan
109892046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
FAM184
SseC
Glyco_transf_7N
Csm1_N
Motif
Other DBs
NCBI-GeneID:
109892046
NCBI-ProteinID:
XP_020340054
Ensembl:
ENSOKIG00005001484
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All DBs
Position
LG6:complement(14973306..15026825)
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AA seq
568 aa
AA seq
DB search
MLRRGLLAWVSRVGVLLVVVCCSLSLLYVMTCSPHSEDNLVSHALPRPGMGVGVGGAAGG
TGAAQSGPTGRNGYQAMLAEREEQHKFHITSLKKQIAQLKEALQERSEQLKGVQDSMERG
TGGGRGGQSPGGGILGEGGQGPGADRSHADLQEFLHSQLGRAEVHQGTRLPSEYAMVPFE
SFTLQRVYQLEMGLTRHPEEKPVRKDRRDELSEALETALQSLNTPRNGADKGHTTKVYSA
SDFIEGITRTEKDKGTVYELTFKGDQSREFRKLVLFRPFGPLMKVKNERVDTANVRINII
VPLSQRADKFRHFMHNFREVCVRQDGRIHLTVVYFGKDQMNEVRSTLENTSREINFKNFT
LLQLNEEFSRGRGLDVGARAWKGGNVLLFFCDVDIYFTADFLNTCRLNTQPGKKVFYPVL
FSQYNPTLIYGNHDYIPPVEQQLVIKKDTGFWRDFGFGMTCQYRSDFINIGGFDVDIKGW
GGEDVHLYRKYLHSNLLVVRSPSRGLFHLWHEKRCADELPPEQYRMCMQSKAMNEASHGQ
LGMLFFRHEIEAHLHKQKPQRLNTAKKT
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggaggggtctgctggcctgggtgtcccgtgtgggcgttctgctggtcgtagtg
tgctgctctctgtccctcctctacgtcatgacctgcagcccccactccgaggacaacctg
gtgagccatgccctgccacgccccgggatgggggttggggtaggaggggcagcagggggc
acgggggcggctcagagcggacccactgggcggaatggataccaagccatgcttgcagag
cgtgaggagcaacacaagttccacatcactagtttaaaaaaacaaatcgcccagctgaag
gaggcgctacaggagcgcagcgagcagctgaaaggagttcaagactccatggagcggggg
acagggggaggccggggtggccagtccccaggaggaggtatccttggggagggaggacaa
gggccaggggccgacaggagccacgctgaccttcaggagttcctccacagtcagctgggc
cgggcggaggtccaccaggggactagactacccagtgagtacgccatggtgcccttcgag
agcttcaccctgcagagagtgtaccagctggagatgggcctgacaaggcaccctgaggag
aagcctgtgaggaaggaccggagggatgagctgagtgaagcgctagagacagccctgcag
agtctcaacacgccccgcaacggagcagacaagggccacaccaccaaggtctactcagca
tcagacttcatagaaggtatcactcggacggagaaggacaaaggcactgtgtatgagctc
accttcaaaggtgaccagagccgtgagttcaggaagctggttctgttccgtccctttggg
ccgctgatgaaggtgaagaacgagagggtggacacagctaacgtccgcatcaatatcata
gtgcccctctcccaacgagccgacaagttcagacactttatgcacaacttcagagaggtg
tgtgtgcggcaggacgggcgtatccacctaactgtggtgtactttgggaaggaccaaatg
aatgaagtcaggagcacgctggagaacacatctagggagatcaactttaagaacttcact
ctgctccagctgaatgaagagttctcccgggggcgtggcctggatgtgggtgccagggcg
tggaaaggagggaacgttctccttttcttctgtgatgtcgacatctacttcaccgctgac
ttcctcaacacctgccgactcaacactcaacctggtaaaaaggtgttctatcctgttctg
ttcagccagtacaacccaaccctgatttacggtaaccacgactacatccctccagtggag
cagcaactggtcattaaaaaggatacaggattctggagagactttggcttcggaatgaca
tgccaataccgatcagatttcatcaacataggtggtttcgacgtggacatcaaaggctgg
ggcggcgaggacgtgcacctttacaggaaataccttcacagcaacctgctggtggtgcgg
tccccgtctaggggcctcttccacctgtggcacgagaagcgctgcgcggacgagctgccc
ccggaacagtacaggatgtgcatgcagtccaaggccatgaacgaggcctcgcacggccag
ctgggcatgctcttcttccgacacgagatcgaggcacacctgcacaagcagaaaccccag
aggctaaacactgccaagaagacatga
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