Oncorhynchus kisutch (coho salmon): 109892052
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Entry
109892052 CDS
T09179
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109892052
Transcription factors [BR:
oki03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
109892052
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Dna2_Rift
Motif
Other DBs
NCBI-GeneID:
109892052
NCBI-ProteinID:
XP_020340060
Ensembl:
ENSOKIG00005009679
UniProt:
A0A8C7DIV1
LinkDB
All DBs
Position
LG6:16924455..16943450
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AA seq
394 aa
AA seq
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MMVHCAGCDRPILDRFLLNVLDQAWHAKCVQCCECNCNLTEKCFSRDGKLYCKMDFFRRF
GTKCAGCLQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKEDYL
SSGAIKEVNLNSVSSCTDRSLSPDLQDPMQDDTKETDNSTCSDKDTNNNENEEQSSGTKR
RGPRTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRGPRRMRSMGGRLEDPDILGPGAYGYYTEYQGDYYGGGNYEFFPHGPP
SSQAQSPAESPYIHGGTMDGSVSAHHPSDDQRFTDMISHADTPSPEPGLPSSLHPVPGEA
YGGGPSPPFSLASNSSYSAPMSHPGQEMGETTVW
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgatggtccactgcgccgggtgcgacaggcccatcctggaccggttcctgcttaacgtg
ttggaccaagcctggcacgccaaatgcgtccagtgctgcgagtgcaactgtaatctgaca
gagaagtgcttctcccgggatgggaaactctattgtaaaatggactttttcaggaggttt
gggacgaagtgcgcaggatgcctccaaggcatctctcccagtgatctggtgcgcaaggcg
cgcagcaaggtgttccatctcaactgcttcacgtgcatggtgtgcaacaagcagctgtcc
accggcgaggaactctatgttatcgacgaaaataaatttgtttgtaaagaagactacctg
agctcaggggcgatcaaggaagtcaacttgaattcagtgtcatcatgcacagacagaagt
ttatcgccggacctccaggacccgatgcaggacgacacaaaagagacggacaattccaca
tgctcagataaggacacgaacaataacgagaatgaggagcagagttcgggtacgaagcgg
cgaggtccgcgaaccaccatcaaagccaagcagctggaaacgctgaaggctgccttcgtg
gccacgccgaaacccacccgacacatccgagaacagttggcccaggagacgggactcaac
atgcgggttatacaggtgtggttccagaaccgtcggtctaaggagcggaggatgaagcag
ctgagtgctctgggggcccggcggcacgccttcttcagagggcccaggaggatgaggtcc
atggggggacgactggaggacccagacatactggggcctggggcctacggatactacaca
gagtaccagggcgactactacggagggggaaactatgaattcttcccccacggccctccc
tcctctcaggctcagtctccagcagaatccccctacatccatggagggaccatggatggc
tctgtgtcagcccaccacccctctgacgaccagaggttcacggacatgatctcccacgca
gatacccccagcccagagcccggcctgcccagctccctgcatcctgtccctggtgaggca
tacggaggggggcccagcccaccattctccctggctagtaactccagctacagcgccccc
atgtcccaccctggacaggagatgggagagaccaccgtctggtag
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