Oncorhynchus kisutch (coho salmon): 109892065
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Entry
109892065 CDS
T09179
Name
(RefSeq) armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X2
KO
K28154
splicing regulator ARVCF
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109892065
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109892065
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Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT_EZ
V-ATPase_H_N
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
109892065
NCBI-ProteinID:
XP_020340071
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Position
LG6:20504421..20537923
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AA seq
879 aa
AA seq
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MPAEVKGEQIPEGPSSLGAMILEPKEPPVEHPLPADDDLDTPTSNTSVVTSTNGSSTTET
QYSEAEDPKAVKLGNDQADTPGTPDTTALQLPPAPQPPSVPHIPLVSDDPSLKPSPLTNG
QHSSESLTTPITTTVTTNTLPPPYNNTNSEPQTEKPEGQNSAYTLPDPPFPGLGGGMCAG
YGSLSRGGVHQSSLHTYWPSRNYQPQPGGHYTLPLPRDIYGQVGLTNQTEREGPGDDTLG
GIHQLRPITTMELLREPSRTRGGYEEALMSQVDGDPISFFQAMSRAQMLQFPHKRSSMVS
LDSIRKDPRWRDPNLSEVITMLSHPMDPVKSNAAAYLQHLCYENDRIKQDVRQLKGVPVL
VGLLDHPKAEVHRKACGALRNISYGKDHHNKVAIKNCDGIPALVRLLRKSSNMEVTELVT
GTLWNLSSHEPLKMMVINHGLQTLTDEVIIPHSGWRRDLTEHSRPQETEWTTVFKNTSGC
LRNVSSDGAEARQRLRECEGLVDALLHALQSAVANKETDNKSVENCVCILRNLSYHVHKE
VPGAERFQEPVANQVPRSGSGGKKKNEADCFGGKKPKEEWFNQSWRNGPGDKKYGTLDLP
KRTQPTKGLEMLYQPEVVRLYLSLLTRSQNHNTLEAAAGALQNLAAGHWAWSSYIRATVR
KEKGLPVLVELLRSDGDKVVRAVAIALRNLAIDRRNKDLIGSYAMRDLVSNLPSGQQRPA
KNLEGDTVVAILNTIHEIISDSPENARGLIQGHGIQKLVAINKTSQSVRETKAASHVLQT
VWAYKDLRNSLYKGGWNKSHFKSTTCGIPKKTKSGKAAYDDITLPLMEKNQDGYSTVELS
DRVGDGLLQSIPERKHFIRAGRPAVGLVERKPPPLDSWV
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagaggtgaaaggggagcagatcccagaggggccctcctctctgggggccatg
atcctggagcccaaggagcccccggtggagcatccattgcctgcagatgatgacctggac
acacccacctccaacacctccgtggtcacctccaccaatggcagttccactacagagaca
caatactcagaggcagaggaccccaaggctgttaaactggggaatgaccaggcagacact
ccaggcactccagacaccaccgcccttcagcttcccccagccccgcagcctccctcggtt
ccccacatccccttggtttcagacgacccatctctgaagcccagtcctctaaccaacggc
caacactcctctgagtccctcacaacccctatcacaaccactgttaccaccaacactctc
cctcctccctacaacaacaccaacagtgagccccagacagagaagcctgaagggcagaac
agcgcttacaccctccctgaccctccctttcctggcctgggtggtggcatgtgtgctggg
tatggcagcctgtctcgtggtggtgtccaccagagctccctccacacctactggccttcc
aggaactaccagccccagcctgggggtcactacaccctgcccctccccagggacatctac
ggccaggtgggcctgaccaaccaaaccgagagggaaggaccaggggatgacaccctgggt
ggaattcaccagctccgacccatcactaccatggagctcctgagggaaccttccagaacc
agaggtggatacgaggaggctctcatgtcccaggtggatggggatcccatctccttcttc
caggccatgtccagggcccagatgctacagttcccccacaagcgcagtagcatggtcagc
ctggacagcatccgtaaggacccacgctggagggatcccaacctgagtgaggtcatcacc
atgctcagccaccccatggacccggtcaagtccaacgccgccgcctacttgcagcacctg
tgctacgagaacgaccgcataaagcaggacgtcaggcagctgaagggggttccagtactg
gtgggcctcctggaccaccctaaagccgaagttcaccgcaaggcctgtggagccctgagg
aacatctcctacgggaaagaccaccacaacaaggtggccatcaagaactgtgacggcatc
ccggccctggtcagactgctgaggaagtccagtaacatggaggtcacagagttggtcaca
ggaaccctgtggaatctgtcctcccatgagcctctgaagatgatggtcatcaatcacggg
ctccagacgctgactgatgaggtcatcatcccccactctggctggaggagagacctcact
gagcactcaagaccccaggagacagagtggacaaccgtgttcaagaacacctcagggtgt
ctcaggaatgtgagctcagatggggcagaggctcgccagaggctgagggagtgtgagggg
ctggtggacgctctcctccatgccctacagtcagcggttgccaacaaggagacagacaat
aagtcagtagagaactgcgtctgtatcctgagaaacctctcctaccacgtccacaaagag
gtgccaggagcggagcgatttcaggaacccgtagccaatcaggtgccacggtcaggatca
ggagggaagaagaagaatgaggcagactgttttggagggaaaaagcccaaggaggagtgg
ttcaatcaaagctggagaaacggaccaggtgacaaaaaatatggtacactggatttacct
aaacgcacacaaccaacgaaaggtctggagatgctgtaccagccagaggtggtgaggctg
tacctgtctctcctcactcgcagtcaaaaccacaacaccctggaggcagcagccggagct
ctgcagaaccttgctgcaggtcactgggcttggtccagttacatccgggccacagttaga
aaggagaaaggtctgcctgtcctggtggagctactgcgttcagatggtgataaagtggtc
cgggctgtagctattgctctacgcaacctggccatagatcgacggaacaaagacctcata
ggaagctatgccatgagggacctggtcagtaacctgcccagtggtcagcagcgaccagcc
aagaacctggaaggggacacagtggtggccattctgaacactatccatgagatcatctca
gacagccctgagaatgcccgtggtctcatacagggtcacggcatccagaaactggtggcc
atcaacaagacaagccaatctgtgcgggagaccaaagcagcatctcatgtcctgcagaca
gtgtgggcctacaaggacctgagaaatagcctttacaagggaggctggaacaagagccac
tttaagtcaaccacttgtggaatacccaaaaaaactaagagcggaaaggcagcctatgat
gacatcacactccctctgatggagaaaaaccaagatggatactccaccgtggagctgagt
gacagagtgggtgatgggttactccagagtatcccagagaggaagcacttcatccgggct
ggaaggcctgcagtgggtctggtggaacgcaaacctccacccctcgattcctgggtctga
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