Oncorhynchus kisutch (coho salmon): 109892233
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Entry
109892233 CDS
T09179
Name
(RefSeq) P43 5S RNA-binding protein
KO
K09191
general transcription factor IIIA
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109892233
03021 Transcription machinery [BR:
oki03021
]
109892233
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109892233
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
109892233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
TFIIIA_zf-C2H2
zf-met
zf-C2H2_6
Ta0938
zf-C2H2_jaz
Phage_zn_bind_2
zf-C2H2_aberr
Motif
Other DBs
NCBI-GeneID:
109892233
NCBI-ProteinID:
XP_020340263
Ensembl:
ENSOKIG00005031456
UniProt:
A0A8C7IFF0
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All DBs
Position
LG6:complement(69709789..69713435)
Genome browser
AA seq
385 aa
AA seq
DB search
MNGVAHKQDSDPRQQLFNCNHADCGATFQREWRLKEHETVHTGAQPFQCNVADCGRRFSR
KSHLSRHALGHTGVKQFRCTFVDCTKAFFKADKLKRHVHYAHGEKDKYFKCNFPNCLLTF
KKRRVYKLHLKEHGISSNFKCSKRGCGVTFDTNVARKAHEKKHAGYRCTQPECNHFEQTW
GKMHKHMAKHPATFTCKLCQKVFKHVDSLRRHKRTHSLQKPVLLCPSSGCKAYFSTTFNL
QHHIRKAHLQLLKYHCCFPDCPRTFAMRESLSRHLAHHDPDANPEKKKRKRPKKAWQKRL
EGHQLPLVEDDLRRLFALRMRVSRRAKVEVNLSGLFNERKIPHFVDSEVNLRDLFSIKPP
HPSCPAERVPVKVTHPEVTDQRLNL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaacggggtagcccacaaacaggactcggatcctcgacaacagcttttcaactgcaac
catgctgattgtggggcgacgttccaacgggagtggcgtttgaaagagcacgagaccgtg
cacacgggagcgcaaccttttcaatgcaacgtggctgattgtggtcgtcgtttctcacgg
aaatctcacctgagccgccacgcacttggccacaccggggtgaaacaattcagatgtacc
tttgtggattgcacaaaggctttcttcaaagcggacaagttgaagcgacacgtccattat
gcccacggagaaaaggacaagtactttaagtgcaattttccaaattgcttattgacattc
aagaaacggagggtgtataaattacatttgaaggagcatggaatatcttctaatttcaaa
tgttcgaagagaggatgtggagtcacgtttgacaccaatgtcgctcgcaaagcccatgag
aagaaacatgcagggtaccgctgcacacagcctgaatgcaatcattttgaacaaacctgg
gggaaaatgcacaaacacatggctaaacacccagccacattcacctgtaagctgtgccag
aaggtgtttaagcatgtcgactctctgcgtagacacaagcgaacccactccctgcagaag
cctgtcctgctgtgccccagcagtggctgcaaggcctacttctccactaccttcaacctg
cagcaccacatccgcaaggcccacctgcagctcctcaagtaccattgctgcttccccgat
tgccccagaacctttgccatgcgggagagcctaagcagacacctggctcaccatgaccca
gatgccaaccctgagaagaagaagcgcaagcggcctaagaaggcctggcagaagcgtctg
gaaggtcaccagctgcccctggtggaggacgacctgcggcgcctctttgccttgcgcatg
agggtgtcacgacgggccaaggttgaggttaacctctcaggcctcttcaacgagcgcaag
atcccccactttgtcgactcggaggtcaacctgcgtgaccttttcagcatcaagccccct
cacccctcctgccctgcagagcgagtccctgtgaaggtcacccacccagaggtcactgat
caaaggttgaacttgtag
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