Oncorhynchus kisutch (coho salmon): 109892325
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Entry
109892325 CDS
T09179
Name
(RefSeq) UV excision repair protein RAD23 homolog B-like isoform X2
KO
K10839
UV excision repair protein RAD23
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03420
Nucleotide excision repair
oki04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109892325
09124 Replication and repair
03420 Nucleotide excision repair
109892325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
oki03051
]
109892325
03400 DNA repair and recombination proteins [BR:
oki03400
]
109892325
Proteasome [BR:
oki03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
109892325
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
109892325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Crinkler
Rad60-SLD_2
UBA_3
CUE
Ubiquitin_4
RAP1
Dsc3_N
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
109892325
NCBI-ProteinID:
XP_020340378
Ensembl:
ENSOKIG00005034094
LinkDB
All DBs
Position
LG6:complement(11938079..11965759)
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AA seq
380 aa
AA seq
DB search
MQITLKTLQQQTFKIDIDEEETVKTLKERIENEKGNDGFPVAGQKLIYAGKILNDDTAIK
DYKIDEKNFVVVMVAKPKAAPAAAQPSSSAATTSSSTTAPTVPTAASPGSDNPPEGSKPA
EERPCSTSAPASTPTSSSGLLTNVNMFEEATSALVTGQSYENMVTEMMLMGYEREQVVAA
LRASFNNPDRAVEYLLTGIPAGEESHAGADPVVPSVGGGTPALNTGSMTTPASVATGANP
LGFLVNQPQFLQMRRIIQQNPSLLPALLQQIGRENPQLLQQISSHQEQFIQMLNEPAQEG
GQGGGGGGGGGGGGGGGVGVGGEAGSGMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFA
CEKNENLAANFLLQQNFDDD
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcactttgaaaaccctccagcagcagacatttaaaatcgacatagacgaagag
gagacggtaaaaaccttaaaggaaagaattgagaatgagaagggaaacgatggttttccg
gttgcagggcagaaattgatatatgcagggaaaatcctaaatgatgacactgctatcaag
gactataagattgatgagaagaactttgtggttgtcatggtggcaaagcctaaagcagcc
ccagcagctgcccagccttccagttctgccgccaccacctcctccagcactacagccccc
actgtacccacggctgcctcgccaggctcagataacccaccagaggggtccaaaccagcc
gaggagaggccctgcagcacttcagcaccagcatcaacccccaccagttcctctggtcta
ttgacaaatgtgaacatgttcgaggaggcaacttctgctctggtgacaggccaatcgtat
gagaacatggtgacagagatgatgctgatgggctacgagagggagcaggtagtggcagcg
ctcagagccagcttcaataacccagacagagctgtggagtacctgcttacagggatccca
gctggggaggagagccatgcgggtgctgacccagtggtgccctctgtgggtggaggaact
ccagctctcaacacaggcagtatgacaacccccgccagcgttgcaacaggagccaatcct
ctggggttcctggttaaccagcctcagttcctccagatgagacggatcatccagcagaac
ccctctctgctccctgccttactacagcagatagggagggagaacccccagcttctgcaa
caaatcagcagccaccaagagcagtttatccagatgctgaacgagccagcccaggagggg
ggacagggtggtggtggaggaggtggtggtggtggtggtggtggtggtggagtgggggtt
ggtggggaggctggaagtggcatgaactacatccaggtcacaccccaggagaaggaggcc
attgagcggctaaaagccctaggattcccagaaggacttgttatacaggcctactttgcc
tgtgagaagaacgagaacttggctgctaacttccttttacaacagaactttgacgatgac
tag
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