KEGG   Oncorhynchus kisutch (coho salmon): 109892379
Entry
109892379         CDS       T09179                                 
Symbol
ell2
Name
(RefSeq) RNA polymerase II elongation factor ELL2 isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    109892379 (ell2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:oki01009]
    109892379 (ell2)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oki03021]
    109892379 (ell2)
Protein phosphatases and associated proteins [BR:oki01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     109892379 (ell2)
Transcription machinery [BR:oki03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     109892379 (ell2)
    Little elongation complex (LEC)
     109892379 (ell2)
SSDB
Motif
Pfam: ELL Occludin_ELL
Other DBs
NCBI-GeneID: 109892379
NCBI-ProteinID: XP_020340467
Ensembl: ENSOKIG00005009520
UniProt: A0A8C7F8U9
LinkDB
Position
LG1:complement(47919373..47943133)
AA seq 717 aa
MLGRQRDDGGGLVKMAALSEDGRYGLNCGRRNADRVTVLHVKLTETAFRAIESHQTCKNV
PSSRPTIQFKGLQGRIKIPKTDSLDGSQNFDFYLSNVGKDNPQGSFECIQQYVSSSGTPH
LVSLGTVQDKVTVCATNDSYQVTRERMAQAEEDSRKRGTKVLKPVGQFRGKKVQIRKPAP
SGSEPVAERKRSTPINPANTIRKCLANNPVSQRPYRDRLVHLLALRSYKKLELLARLQRD
GVSQKDRSSLGSTLQQVANLNPKDNSYSLKDFVYRDVQRDWPGYSEDDRVQVNGILVRKL
GLPTETLSSSSPLKDGLPASPQQKCQPELPVHFTDPLMPKKPRISHVTSQGPPAAPTPIP
TSSSRERRAPQKEDDSHHSAAATTNTKRSSLPASTTTTAGPPLNHHHLPPPSQLQVSQRP
PPSHQSGPGSNSNSPSTPEGRGTQDLPLDQSSTCLEPPSPIATSSPPSRTTDRYGPCMPP
PASSSPQSHPALTISSSSSSSTIIPPPSPSSSKKSKKKSKKHKEKDREKERRKDVRSSKG
DGPGVSPRGVPVVDAQRPRKRHRDKVEERQTPVIPAKSPVCLDEDTKERPVHSSDLSSTT
VMPDYISKYTAVVSMDQRQTYKDEFNAEYEEYRVLHTRVENITRRFHHLDTESRRLPPGT
KEYQEVHEEVLQEYNKMRQHSPNYQVEKQRCEYLHNKLAHIKRLIADFDQRRAQSWR
NT seq 2154 nt   +upstreamnt  +downstreamnt
atgctcggacgtcagagggacgatggtggagggctggtaaagatggcggcgctctccgag
gatgggaggtatggactgaattgtggccgacggaatgcagatcgagtcaccgtattgcac
gtaaaattgacagagacagctttcagagcaatagagagccaccaaacctgtaagaatgta
ccgtcctcgcggccaacaatacaattcaagggactccaagggcgcattaagatcccaaag
actgactctctggatggctctcagaactttgacttctatctgtccaacgtgggcaaggac
aaccctcagggaagctttgagtgcatccaacaatatgtgtccagctcagggaccccccac
ctggtgtccttggggacggttcaggacaaagtcacggtgtgtgccaccaacgactcctac
caggtgacccgggagcgcatggcgcaggccgaggaggacagtcgcaaacgagggaccaag
gtcctcaagcctgtgggccagttcagaggtaagaaagtccagatccgcaagccagcgccg
tcaggctccgaaccagttgcggagcgcaaacgctccacccccatcaacccagccaacacc
atccgcaagtgccttgccaacaacccggtgtcccagcggccctaccgcgaccgcctcgtc
cacctgctggctctgcgctcttacaagaagctggagctactggccaggttgcaacgggac
ggggtcagccagaaggaccgcagctctctggggagcaccctgcaacaagtggccaacctg
aaccccaaagataactcttactctctgaaggactttgtgtaccgcgatgtgcagagggac
tggccgggctactccgaggatgaccgcgttcaggtcaacgggatcttggttcggaaactg
ggccttcccactgagacactttcctccagcagtcctcttaaagacggcctcccggcttcc
ccacagcagaagtgccagcccgagttgccggttcacttcaccgaccccctgatgccgaag
aagccccgcatctcccatgtcaccagccaagggccccctgccgccccaacccccatcccc
acctcgtcctctagagagcgccgcgccccccagaaggaggacgacagccaccacagcgct
gctgccaccaccaacacaaagcgctcgtctctcccagccagtaccaccaccactgctggc
ccgcccctcaaccaccaccaccttccccctccctcccagctccaggtttctcaacgacct
cccccgtcgcatcagtctggcccgggctccaactctaactcgcccagcacgcccgagggc
cgtggcacccaggacctgcccctggaccagagctccacctgcctggaacccccctcaccg
atagccacctccagccccccgagcaggaccactgaccgttatggcccctgcatgccgcca
ccagccagctccagtccacaaagccacccagccctcaccatctcttcatcctcctcatcc
tctaccattatcccccctccctcgccaagcagtagcaagaagtccaagaaaaagtcaaag
aagcacaaagagaaggaccgcgagaaggagaggcgcaaggatgtgcgaagcagtaaaggc
gatggccctggtgtcagcccccgaggggtgccggttgtggacgctcagaggcccaggaag
agacaccgcgacaaggtggaggagagacaaacgccagtcatccctgccaagagcccagtc
tgcctggacgaagacactaaagagaggccagtccactcgtcagacctatcctccaccact
gtgatgccagattacataagtaagtacacggcagtggtgtctatggaccagaggcagacc
tacaaggacgaattcaacgccgagtatgaggagtaccgcgtcctgcatacccgtgtggag
aacatcacccgccgcttccaccatctagacaccgagtccaggaggctgcctcccggcacc
aaagagtaccaggaagtacatgaagaagtgttgcaggagtacaataaaatgagacaacac
agcccaaactaccaggtggagaagcagcgctgcgagtacctgcacaacaagctggcccac
atcaagcgcctcatcgctgactttgaccagcgcagggcccagtcctggcggtag

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