Oncorhynchus kisutch (coho salmon): 109892415
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Entry
109892415 CDS
T09179
Name
(RefSeq) peptidylprolyl isomerase domain and WD repeat-containing protein 1
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109892415
03110 Chaperones and folding catalysts [BR:
oki03110
]
109892415
Enzymes [BR:
oki01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
109892415
Spliceosome [BR:
oki03041
]
Complex C
Other components
PPlases
109892415
Chaperones and folding catalysts [BR:
oki03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
109892415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_WDR19_2nd
Beta-prop_Vps41
WD40_Gbeta
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
109892415
NCBI-ProteinID:
XP_020340515
Ensembl:
ENSOKIG00005009851
LinkDB
All DBs
Position
LG6:complement(16962977..16967418)
Genome browser
AA seq
626 aa
AA seq
DB search
MAATTDNADLKRKLNDNQDDGEAGEEEEWVGPMPSEATQTKKRKVLEYERVYLDNLPSAA
MYERSYMHRDVITHIVCSKTDFIITASQDGHVKFWKKKEDEGVEFVKHFRSHLGVIECIS
VSADGALFCSVGDDQAMKVFDVVNFDMINMLKLGFHPGQCEWIYNPGDAICCVACSEKST
GKIFVYDGRGSNEKLHTFDKMHSSPLSQIRLNPRYRVIVSADKAGMLEYWTGLPSEFKFP
RHVDWQYKTDTDLYEFAKNKTYPTSLAFSHDGKKMATIATDRKVRIFRFLTGKLMRVFDE
SLSKFTELQQMKQQLPDMEFGRRMAVERELEKVDGIRLTNIIFDETGHFVLYGTMLGIKV
INVETNRCVRILGKLENIRVVKLSLFQGVAKACNTAPTIEMKASDNPALQSTMPDPTIFC
TAFKKNRFYMFSKREPEDTKSAESDRDVFNEKPSKEEVMAATQAEGPKRVSDSAIIHTTM
GDIHIKLFPVECPKTVENFCVHSRNGYFNGHIFHRVIKGFMIQTGDPTGTGMGGESIWGG
EFEDEFHATLRHDRPYTLSMANGGPGTNGSQFFITVVPTPWLDNKHTVFGRSAKGMEVVQ
RISNLKVNPKTDKPYEDISIINITIK
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaccacagataacgcagatctgaaacgaaaactaaacgataatcaggatgat
ggagaagctggagaagaggaggaatgggttggacccatgccaagcgaagcgacacagacc
aagaagagaaaagtgctggagtatgaacgtgtgtatttggacaacttgccatcggcagcc
atgtacgagaggagctacatgcatagggatgttataacgcacattgtctgttccaagaca
gatttcatcatcacagccagtcaggacggccatgtgaagttctggaaaaagaaagaagat
gagggggtagagtttgtcaaacacttccgcagtcatcttggagttatagagtgtatttct
gtcagtgctgatggagctctattctgttctgttggggacgaccaggccatgaaagtcttt
gatgtggtcaactttgacatgatcaacatgctgaagctgggtttccaccctggccagtgt
gagtggatctacaacccaggcgatgccatctgctgcgtggcctgctcagagaaatccact
gggaagatcttcgtctatgatggacgaggaagcaacgagaagctccacaccttcgacaag
atgcactcctctccgctgtcccagatccgcctcaaccctagatacagggttatcgtctcc
gcagacaaggctggaatgctggagtattggaccggcctccccagtgagttcaaattcccc
aggcacgtggactggcagtataagactgacacagacctttatgagtttgccaaaaacaaa
acctaccccaccagtctggccttctcccacgacgggaagaagatggctaccatcgcaacc
gacaggaaagtcaggatcttccgcttcctgacgggaaaactgatgagggtgtttgatgag
tcgttatcgaagttcacagagctgcagcaaatgaagcaacagctgccagacatggagttt
ggtcggaggatggcggtggagagggaactggagaaagtagatggcatcaggctgaccaac
atcatctttgatgagactggtcactttgtcctctacggaaccatgctgggcatcaaggtc
atcaatgtggagactaacaggtgtgtacgtatcctggggaagctagagaacattcgtgtg
gtgaagctgagcctgttccagggggttgccaaggcatgcaatacagctcccaccattgag
atgaaggcatcagacaacccggccctgcagagcacaatgccagatcccaccatcttctgt
actgctttcaagaagaaccgcttctacatgttctccaagagggagccggaggacactaaa
agtgccgagtcagacagagacgtgttcaacgagaagccgtctaaggaggaggtgatggct
gctacccaggcagagggacccaagagggtgtcagacagtgctatcatccacaccaccatg
ggagacatccacatcaaactgttccctgttgagtgtcccaaaacagtggagaacttctgt
gttcacagcaggaatggttatttcaatggccacatattccaccgcgtcatcaagggcttc
atgatccagacaggggaccctacagggacgggcatgggaggggagagtatctggggaggg
gagtttgaggatgagttccatgccacgctgagacacgaccggccctacacactcagtatg
gccaacggaggccccggcaccaacggatcacagttcttcatcaccgtcgtgcccacgccc
tggctagacaacaaacacaccgtgtttggaaggagtgccaaaggaatggaggtggttcag
cggatctccaacctcaaagtcaaccctaaaacagacaaaccttacgaagacatcagcatc
attaacatcaccatcaagtaa
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