Oncorhynchus kisutch (coho salmon): 109892444
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Entry
109892444 CDS
T09179
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
109892444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109892444
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109892444
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
109892444
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
109892444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
Prefoldin_2
SlyX
Motif
Other DBs
NCBI-GeneID:
109892444
NCBI-ProteinID:
XP_020340567
LinkDB
All DBs
Position
LG6:17841399..17890902
Genome browser
AA seq
883 aa
AA seq
DB search
MSTGKPSGIKPPSKISRPTGLPTRTSPSSAASKPVPPEKSPTQDGAVDYRVGEKVWVNGN
KPGYVHFLGDTQFAPGQWVGIVLDEAIGKNDGSVAGVQYFQCEDGRGIFTRPSKLTKTAM
PEREANGGQPNPGETGAKSPSSAAAGAATTTGNSTKTPLSRTVTGNGSMSNLSETDSARK
TRRELRLGDRVLVGGTKAGVVRFMGETEFAKAMWCGVELDEPLGKNDGAVAGTRYFQCLP
RYGLFAPVHKVTRIGFPSTLAKAKASSRRRSTMKRSPSASSMSSLSSVTSSVSGKPSQAG
LLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDMERGEVAKATSHAGEVQQELSL
LRKVQEQNAMEMEDKLDQLRKLVETADRDKVELLSQLEEEKRKVEDLQFTVEEACITKGD
LETQTKLEHAHIKELEQSLLFEKTKADKLQRDLEDTRVATVSEQSRIMELEREVAALQLR
LHSSQQTGGAVSLSPEAFSNLKARAQSQEKKISELNVNLDSRQKQLCSVEEDKSSLEQQL
TSLRQKLDVAEEKNKRTARTMQELEKRGEQTEKEREAQREENQGKEKELQDRLTQAAESS
ERTAHSLEQLIIEKTAVEAQLEALKQQNSKFQEELSLSQVRGSSESQHIGTLCKEIEVLK
LASLTSQNQPDMKDRETLSNQETDEDKELETLRDEIAVLRGENAMAKTLQSAVETLERDK
AQLQERVTSLEQRLLGRQASEGGDSGVPSSGDTALDQLREEKEFAEGQINFLNSVIVDLQ
RKNEELKVKLKKMALAEFNGNDGTDGLEEGGSKKDKKAPPRLFCDICDCFDLHDTEDCPT
QAQSPDSVPHSSFKGKPADQRPYCDICEAFGHSIESCQEDQTF
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaggcaagcccagcggaatcaagccccccagtaagataagcaggccaactggg
ttaccaacacgcacctccccttcctctgctgcttccaagcctgtaccccctgagaagtct
cccacccaggatggagcagtggactaccgggtgggggagaaggtgtgggttaacggcaac
aagccaggatatgtccacttcctgggggatacacagtttgccccggggcagtgggtcggc
atcgtcctggatgaggctatcgggaagaacgacgggtcggtggcaggtgtccagtatttc
cagtgtgaggacggcagagggatattcacacggccctccaagctgaccaagacagctatg
ccggagagggaggccaatggtgggcagcctaaccctggcgagacaggggccaagtcccct
agctctgctgctgctggggctgctactaccactggtaacagcaccaagacaccgctgagt
agaaccgtgaccggcaatgggtcaatgtccaacctctctgagaccgactcagccaggaag
accagaagagaactaagactgggagaccgcgtgctggtggggggtactaaggcaggggtg
gtgaggttcatgggagagacagagtttgccaaggcgatgtggtgtggagtggagctggac
gaacctcttgggaagaatgatggagccgtggctggaaccaggtatttccagtgcctgccg
cgatacggtctgtttgctccagtccataaggtgactcgtatcggcttccccagcaccctg
gctaaagccaaggcttcctctcggagacgctccaccatgaagaggagtcccagtgcctcc
tccatgagctccttgagctctgtcacctcctctgttagtgggaaacccagccaggctggc
ctgttgacagagacctcgtcacggtatgctcgtaagatctctggcaccacagcgctacag
gaagcgctgaaggagaagcagcagcacatcgagcagctattggccgagagagacatggaa
cgcggggaggtcgccaaagcaaccagccatgcgggagaggtgcagcaggaactgtctctg
ctcaggaaggttcaggagcagaatgctatggagatggaagataagctggaccagctgcgt
aaactggtggagacagcagacagagacaaggtggagctgctcagccaactggaggaggag
aagaggaaagtggaagacctgcagttcactgtggaagaggcttgcatcactaaaggtgac
ctagagacgcagaccaaactggagcatgcccatattaaggagcttgagcagagccttctg
tttgaaaagaccaaagctgacaaactgcagagggatttagaggacactagggtggcaaca
gtttctgagcagtccaggatcatggagctggagagagaagtagcggcgctgcagttgaga
ctacactcctcccagcagacagggggcgctgtgtcgctgtcaccagaggcgttcagcaac
cttaaggcacgggcccagtcccaggagaagaagatcagtgaactgaatgtgaatctggac
agcaggcagaaacagctatgctctgtagaagaggacaagagctccctggaacagcagcta
accagcctgagacagaaactggacgtagcagaggaaaagaacaagaggacggcacgaacc
atgcaagagctggagaagagaggagagcagacggaaaaagagagggaggcacagagagaa
gagaaccaaggcaaagagaaagagcttcaggatagactgacgcaggctgctgagtcatca
gagaggaccgcccactcactggagcagctgatcattgagaagacagcggtagaggctcag
ctcgaggcactgaaacagcagaattccaaattccaggaagaactcagtctctcgcaggtg
cgaggcagctcagaaagccagcacatcggaactctgtgcaaggaaattgaggtactgaag
ctggccagtctgacgtctcagaaccagccagacatgaaagacagggaaactctgtccaac
caagagacagatgaggacaaggagctggagactctgagggatgagatcgcggtgctgcga
ggtgagaacgccatggccaagacgctgcagtctgccgtggagacgctggagagagacaag
gcccagctacaggaacgcgtcaccagcctggagcagaggctattgggacggcaggcctcc
gagggaggggacagtggagtgccttcctcaggtgacacagctctggaccagttgagagaa
gagaaggagtttgcagagggacagattaacttcctgaacagtgtgatcgtggacctacag
aggaagaatgaggagttgaaggtcaagctgaagaagatggctttggctgagttcaatggc
aatgacggcactgatggtttggaggagggtggatctaagaaggacaagaaggctcctcct
cgtctgttctgtgatatctgtgactgttttgacctgcatgacactgaggactgtccaacc
caggcccagagccccgactcagtcccccactcttccttcaagggcaaacctgccgaccag
cggccgtattgcgacatctgtgaggccttcggtcactccatagagtcctgccaggaagac
cagaccttctag
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