KEGG   Oncorhynchus kisutch (coho salmon): 109892478
Entry
109892478         CDS       T09179                                 
Name
(RefSeq) 3'-5' exoribonuclease 1
  KO
K18416  3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oki03019]
    109892478
   03036 Chromosome and associated proteins [BR:oki03036]
    109892478
Messenger RNA biogenesis [BR:oki03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     109892478
Chromosome and associated proteins [BR:oki03036]
 Eukaryotic type
  Gene silencing
   RNA interference (RNAi) pathway
    Other RNAi proteins
     109892478
SSDB
Motif
Pfam: RNase_T SAP
Other DBs
NCBI-GeneID: 109892478
NCBI-ProteinID: XP_020340628
Ensembl: ENSOKIG00005018940
LinkDB
Position
LG6:complement(20079710..20082947)
AA seq 346 aa
MSKMEEYKENIQDRGGNVKLSSKPEEDDKSCSRVRVCSNIGEPVPQASPTHEDFSDPVYK
DIALANGHINRMNKDELRAKLAELKLDTSGVKDVMKKRLKNYYKKQKLSMTQSVTAGDAT
DTYYDYICVVDFEATCEQDNPADFTHEIIEFPVVLLNTHTLEIEDTFQEYVRPEVNTQLS
EFCVKLTGITQKMVDEADTFPDVLERVVLWLQEKELGTKYKYTLLTDGSWDMSKFMNTQC
RLNRLRFPQFAKKWINIKKLYGNFYKVPLTQTKLSCMLEKLGLKYEGRPHSGLDDSRNIA
HIAMRMLQDGCQLRINERMHEGQLRAVPSSAPVEGAPPPHTPCSRD
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgtcaaaaatggaggaatacaaagagaatattcaagacaggggtggcaatgtgaaattg
tcctctaaaccggaggaagatgacaagtcttgcagcagagtcagagtttgtagtaacatc
ggtgaacccgtccctcaagcatctcctactcacgaggacttcagtgatcctgtttacaaa
gacattgctcttgcaaatggacatatcaaccgcatgaacaaggatgagcttcgtgccaaa
ctggcagaattgaagcttgacacaagtggtgtgaaggatgtgatgaagaagcggttgaag
aactactacaagaaacagaagctgtcgatgacgcagtctgtaacagcgggtgacgccacg
gatacctactacgactacatctgcgtggtggactttgaagcaacgtgtgaacaggacaac
cccgctgacttcactcatgaaatcattgagttcccagtggttctgctcaacacgcacact
ttagagattgaagacacctttcaggaatatgtcagaccagaagtcaacacacagctgtca
gagttctgtgtaaagttgacaggaataacacagaaaatggtggatgaagctgacacgttc
cctgatgtccttgagcgggttgtgctttggcttcaggagaaagagcttggcacaaaatac
aaatacactcttcttacagacggatcttgggacatgagcaagttcatgaacacccagtgc
cgtttaaatcgtctcagatttccacagtttgcaaagaagtggatcaacatcaaaaagtta
tacgggaacttctataaggtccctctcacccagaccaagctgagttgcatgcttgagaag
ctgggactaaaatacgagggccgtcctcactctggcctggatgactcgcgcaatatcgcc
cacattgcaatgcgcatgctgcaagacggctgccaactgcgcatcaacgagcgcatgcac
gaaggacagctgcgggctgtgcccagctctgcccctgtggaaggagccccacccccacat
accccctgcagcagagactag

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