Oncorhynchus kisutch (coho salmon): 109892486
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Entry
109892486 CDS
T09179
Symbol
skp2
Name
(RefSeq) S-phase kinase-associated protein 2 isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04068
FoxO signaling pathway
oki04110
Cell cycle
oki04120
Ubiquitin mediated proteolysis
oki04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109892486 (skp2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
109892486 (skp2)
04150 mTOR signaling pathway
109892486 (skp2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109892486 (skp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109892486 (skp2)
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
109892486 (skp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
LRR_NXF1-5
LRR_R13L1-DRL21
LRR_FBXL18
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
109892486
NCBI-ProteinID:
XP_020340640
Ensembl:
ENSOKIG00005021126
LinkDB
All DBs
Position
LG6:20273839..20278230
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AA seq
412 aa
AA seq
DB search
MSHEGPLQELPCLNEYLEGSMLSISQKSKRKKRERIGDCLDTENTPHELIHQWSPPHKQR
VVCKGKENEENQFVLARRPRKRREFSGLSWDTLPDELLLGILSCLPLQDLLRMSRVCKRW
HRLAFDESLWHSVDLVGNPQLDQALGQVLMAGVLGLRCPCTCIGEPHFTHTQHLRVQHMD
LSSCTVSTLFLDDIISRCRRLENLSLEGLELSDWIIQSLSQNTELVRLNLCGCSGFSPDS
LGEMLKSCSRLEELNLSWCDFSTDHVKAVVSNIPSNITQLNLSGYRQNLTMEDLKDLVER
CPHLVNLDLSDSVLMTTSSFPILQQLQSLRHLALSRCYQIHPAALADFEKFPELQTLEVY
GLVQDTYLPILSKSLPRLQINTRPFSGVARPTEATRRDRAMWGMTCRLVFRS
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacgaagggcctctgcaggagttgccctgcctgaatgagtatttggagggatca
atgctgtccatatcccagaagagcaaacggaaaaaaagagaacgcatcggagactgtctg
gacaccgagaacacccctcacgagctcattcaccagtggtcaccacctcacaagcagcgg
gtggtctgcaagggaaaagagaatgaggagaaccagtttgtgcttgccaggcgaccaagg
aaaaggagggagttctcaggcttgtcctgggacacactaccagatgagttactgttggga
atcctttcctgccttcccctgcaggacctcctccggatgtcccgggtctgcaagcgttgg
catcgcttggcgtttgacgagtctctgtggcatagtgtggatcttgtagggaacccccag
ctggatcaagctcttgggcaggtgcttatggctggagtactaggactgcgctgcccctgt
acctgcattggagaaccacatttcacccacacacaacacctgcgtgtccagcacatggat
ctctccagctgcactgtctcaaccctgtttctagatgacatcatctcccgctgcaggcga
ctagagaatctaagcttggagggactggagctctcggactggatcattcagtccctatcc
cagaatactgagctggtacggctcaacctgtgtggctgctctggcttctcacccgactcg
cttggtgagatgctcaaatcctgctcacggcttgaagagctgaacttgtcatggtgtgac
ttcagtactgatcatgtgaaggctgttgtcagtaacatcccctccaatatcactcagctc
aaccttagtggctacagacagaaccttactatggaagatctgaaagacttggtggagaga
tgtcctcaccttgtaaatctggatttaagtgacagtgttctgatgacgacctcaagtttc
cccatcctgcagcagctgcagtctcttagacacttagcgttgagccgttgctaccagatc
caccctgctgccttagctgactttgagaagtttccagagctgcagacgttagaggtgtat
gggctggtccaggacacttacctgccaatcctgagtaaaagtttgccccgtctccaaatc
aacacccggccattctcgggtgtggcccgtcccaccgaggccacccggcgggaccgcgcc
atgtggggtatgacctgtcgactggtgttcaggtcctag
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