Oncorhynchus kisutch (coho salmon): 109892501
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Entry
109892501 CDS
T09179
Name
(RefSeq) serine/arginine-rich splicing factor 9-like
KO
K21123
serine/arginine-rich splicing factor 9
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03040
Spliceosome
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109892501
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109892501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109892501
Spliceosome [BR:
oki03041
]
Common components
Common spliceosomal components
SR proteins
109892501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
DUF2457
RRM_7
Nup35_RRM_2
RRM_9
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
109892501
NCBI-ProteinID:
XP_020340664
Ensembl:
ENSOKIG00005001135
UniProt:
A0A8C7C6V5
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All DBs
Position
LG6:complement(21633576..21637842)
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AA seq
246 aa
AA seq
DB search
MTDGRIYVGNLPMDAQEKDIEDLFFKYGKIRDIELKNNRGTIPFAFVRFDDPRDAEDAVY
GRNGYGFGDSKLRVEYPRSSGAKFSGPMGEGGPRGRFGPPTRRSEFRVIVTGLPQTGSWQ
DLKDHMREAGDVCFADVQRDGEGVVEFVRREDMEYALRRLDGTEFRSHQGETANIRVHGE
RGASYGRSRSRSRSPRGRGYSPPPYQSRGSPPQRYQSPPRRLVSRHSPPARRHPVPYHSP
PPRHYR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggaaggatctacgtgggaaatcttccaatggacgcccaggagaaggacata
gaggatctcttcttcaaatatggaaaaatccgggatatcgaactaaagaataacagggga
accatcccttttgcttttgttcgcttcgatgatccacgggatgcggaagacgcggtctat
ggaaggaatggatatggattcggagactccaagctgcgtgtagaataccctcgctcctct
ggcgccaaatttagtggccctatgggagaaggaggtcctagggggaggtttgggccccca
actcggagatctgagttccgggtgatagtgactggcttgccccaaaccgggagctggcag
gatctgaaagaccacatgcgtgaggcaggggatgtttgtttcgccgacgtgcagcgagat
ggtgaaggagtggtggagtttgttcgtcgggaagacatggaatacgccctgcgcagactg
gacgggactgagttccgttcccatcagggggagacggcaaacattcgtgtccacggagaa
cgtggtgccagttacggtcgctcgcggtctcgctccagatccccccgagggcgtggctac
tcaccacctccttaccaaagcagagggtcccctccacagcgctaccagtcacccccacgc
cgccttgtgtcacgccatagccccccagcaaggcgacacccagtaccgtaccatagcccg
cccccacgccactatcgatag
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