Oncorhynchus kisutch (coho salmon): 109892548
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Entry
109892548 CDS
T09179
Name
(RefSeq) F-box/WD repeat-containing protein 11 isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04114
Oocyte meiosis
oki04120
Ubiquitin mediated proteolysis
oki04218
Cellular senescence
oki04310
Wnt signaling pathway
oki04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109892548
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109892548
04340 Hedgehog signaling pathway
109892548
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
109892548
04218 Cellular senescence
109892548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109892548
03036 Chromosome and associated proteins [BR:
oki03036
]
109892548
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
109892548
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
109892548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_C
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-TrCP_D
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
ANAPC4_WD40
F-box-like
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_IP5PC_F
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_DCAF4
NBCH_WD40
WD40_like
Beta-prop_IFT140_1st
Beta-prop_HPS5
F-box
Beta-prop_WDR11_2nd
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_WDR19_1st
PEP5_VPS11_N
WD40_2
DUF1513
DUF4508
Motif
Other DBs
NCBI-GeneID:
109892548
NCBI-ProteinID:
XP_020340749
Ensembl:
ENSOKIG00005012479
UniProt:
A0A8C7M5D5
LinkDB
All DBs
Position
LG6:complement(23533757..23567663)
Genome browser
AA seq
525 aa
AA seq
DB search
MEPEMEDKTLEQMNSTFMDSQTDERSKKTTVFKTITNGLMTGSRKRPSEGNYEKEKEVCI
QLFDQWSEADQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPAQGLDHIAENILS
FLDARSLCSAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERHQWEKYLFKNRTT
EVPPNSYYRSLYPKIIQDIETIEANWRCGRHNLQRIQCRSENSKGVYCLQYDDDKIISGL
RDNSIKIWDKQSLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLI
HHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKYIV
SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR
VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR
LQFDEFQIISSSHDDTILIWDFLNVSTNGQTEGRSPSRTYTYISR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggagccggagatggaggacaaaacgttggagcagatgaactccactttcatggactcc
cagacagatgaacgatcaaagaaaaccacagtgttcaagacgatcacgaacggtctgatg
acgggctcaaggaagcggccatcggaagggaactatgagaaggagaaggaagtgtgcata
cagctgtttgaccagtggtctgaggctgaccaggtggagtttgtggaacacctgatctca
cgcatgtgccactaccaacacggccacatcaactcctacctcaaacccatgctccaaagg
gacttcatcactgcactgccagctcagggtctggaccacatagcggagaacatcctgtcg
ttcttggatgcgcgttctctctgctcggcagagctggtgtgtaaggagtggcagagggtc
atctcagagggcatgctgtggaagaaactcatagagcgtatggtccgtacagaccctctc
tggaaaggcttgtcagagaggcaccagtgggagaagtacctgtttaaaaatcgaaccaca
gaagtcccaccaaactcctactaccgctccctttaccccaaaatcatccaggacatagag
acgatcgaggctaactggaggtgtggtcggcacaatctgcagcggatccaatgtcgttca
gagaacagtaagggggtttactgtctgcagtatgatgacgacaagatcatcagcggactc
cgagacaactccattaagatctgggataagcagtctctggagtgtctgaagatcctgacg
ggtcatacaggctcagtgttgtgtctgcagtatgatgagcgggtcatcgtcaccggctcc
tcagactccaccgtcagggtgtgggatgtgaacactggggaggtgctgaacactctgatc
caccacaatgaggcggtcctccacttgcggttctgtaacggtctgatggtgacgtgctct
aaggaccgttccattgccgtgtgggacatggcctcacccaccgacatcagtctgcgccgc
gtgctggtcggccacagagcagcggtcaatgtggtggacttcgatgacaagtacatcgtg
tcagcatccggtgaccgtaccatcaaggtgtggagcaccagcacgtgtgagtttgttcgc
acactgaacggccataagagaggcattgcctgtctgcagtacagagaccgactagtggtc
agtggctcatctgacaacactatccggttgtgggatattgagtgtggggcatgtttgcgc
gtattggaaggccatgaagagttggtccgctgcattcgattcgacaacaaaaggatcgtt
agtggagcctacgatggtaaaatcaaagtatgggacctgcaagctgctctggaccctcgt
gcccctgccagcaccctctgtctgcgcacactggtggagcattctgggcgtgtattccga
ctacagtttgatgagttccagatcatcagcagttcccatgacgacaccatcctcatctgg
gatttcctgaacgtgtcgaccaatggacagactgagggccggtcgccctctcgcacgtac
acatacatctccagatag
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integrated database retrieval system
