Oncorhynchus kisutch (coho salmon): 109892550
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Entry
109892550 CDS
T09179
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-like
KO
K03265
peptide chain release factor subunit 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109892550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109892550
03012 Translation factors [BR:
oki03012
]
109892550
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
109892550
Translation factors [BR:
oki03012
]
Eukaryotic type
Release factors
109892550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
109892550
NCBI-ProteinID:
XP_020340751
Ensembl:
ENSOKIG00005012973
UniProt:
A0A8C7FLU0
LinkDB
All DBs
Position
LG6:complement(23571897..23580024)
Genome browser
AA seq
446 aa
AA seq
DB search
MADDPNAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYHKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAATLFLCNDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKILKLVDISYGGENGFNQAIELSAEVLTNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKAMEMGAVEILIVYENLDTMRYILRCHGAEGLAMAEKGTDEKTLYLTPEQE
KDKSHFTDKETGQDHELIESLPLLEWFANSYKKFGACLEIVTDKSQEGSQFVKGFGGIGG
ILRYRVDFQAIEYQGEDDELFDLDDY
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccaacgcagcggataggaacgtggagatatggaagataaagaagttg
atcaaaagtctggaagctgctcgggggaatggcacgagtatgatatccctgatcatccca
cctaaggaccagatctccagagtggccaagatgttggctgatgagtttggcactgcatcc
aacattaaaagcagagtaaacaggctctctgtgcttggagccatcacatctgtacagcag
agactcaaactctaccataaagtgcctcccaacggcttggttgtgtactgtggcaccatt
gtgactgatgagggcaaagagaaaaaagtcaatatcgactttgagccttttaaaccaatc
aacacttctctgtatctctgtgacaacaagttccacacagaggctcttacagcattgctc
tcagatgacagcaagtttggtttcattgtgattgatggaagtggcgccctcttcggaacc
ctacagggcaacaccagggaggtgctgcataagttcacagtggacctacccaagaagcac
ggcagaggaggacagtctgccttgcgttttgctcgtttgaggatggagaagagacataac
tacgtgcggaaggtggcagagactgcagccacgctttttttgtgcaacgacaaggtcaac
gtagcaggcatggtcttagctggttcagctgacttcaagacggagctcagccagtcagac
atgtttgacccgaggcttcaagctaagatcctgaagctggttgacatatcatatggtggg
gagaatggcttcaaccaggccattgaactgtccgcagaagtgcttaccaatgtcaaattc
atccaggagaagaaactaataggacgatactttgatgagatcagccaggatacggggaag
tactgctttggggtggaagacacactgaaagccatggaaatgggtgctgttgagatcctg
attgtttatgagaacctggataccatgagatacatcctacgttgccatggagcagaggga
cttgctatggcggagaagggtaccgatgagaagacgttgtatttgacaccagagcaggag
aaagacaagtctcacttcacagacaaagagactggtcaggaccatgagctgatcgagagc
ttgccattacttgaatggttcgccaatagctataagaagtttggagcctgtctggagatt
gtcactgacaagagccaagaaggatcccagtttgtaaaaggctttggtggaattggtggg
atcttgcggtacagggtggatttccaggccatagagtaccaaggagaagatgatgagtta
tttgatttggatgactactag
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