Oncorhynchus kisutch (coho salmon): 109892610
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Entry
109892610 CDS
T09179
Name
(RefSeq) nuclear pore glycoprotein p62 isoform X1
KO
K14306
nuclear pore complex protein Nup62
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109892610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109892610
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109892610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
TP0873_N
Motif
Other DBs
NCBI-GeneID:
109892610
NCBI-ProteinID:
XP_020340862
Ensembl:
ENSOKIG00005050517
LinkDB
All DBs
Position
LG6:complement(28273044..28282796)
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AA seq
583 aa
AA seq
DB search
MSGGFNFGQASSTGFSFGAPKTTAATAPATGFGMPSAAAPGGGFSFGTPSTPQAPVAAPQ
SSGLFAMPIQGSTNPTGGFSFGTPAQSSTPAGGGFSFGTPIAKLNLGTPVASQPALTGLT
MGMATPSSGTGFGLGGGLATQTTAAPAGGGFSFGAAGGLGAPVAQTQPQTQPAAAGGLSL
GTPAEVTQIMGGGFSFGAAKVQATTAPAPTVTVGGGFSFGNSTPASLSLGTQPTSLTLNS
VASTAVPTTTQVGGFAFGVKPSATPAPTATAPATQASLGSSLFAVPASTAAPATAAITGF
LGAAPTSAAPAATSTAGSTLGFMLKPLGAVTATTTAPVGTVFVLAAPTTTTGFSLAMKPA
GAIGIGVTAPITGVATTIATVTASAPPVMSYIQLEGLINKWSLELEDQERHFLQQATQVN
AWDRTLVENGEKITSLHREMEKVKLDQRRLDQELDFILSQQKELEDLLSPLEESVKEQSG
TIYMQNADEERERTYKLAENVDAQLKRMSQDLKEIIEHLNTSSGPADNSDPLQQICKILN
AHMDSLQWIDQNSVLLQRRVEDVSKLCDNRRKEQEKTFRITFH
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaggattcaactttggacaagcgtccagtactggattcagctttggagctccc
aaaaccacagctgcaactgccccagccacaggctttgggatgcctagtgctgcagctcca
ggtggtggcttctctttcggaacccccagcactccccaggccccagtagctgccccccag
agctctgggctgtttgctatgcccatccaaggtagcacaaacccaactggagggttcagc
tttgggacccctgcacagagcagtactcctgcaggaggaggcttctcttttgggactccc
attgctaaactcaatctgggtacaccagtcgcctctcaacctgcactgactgggctaact
atggggatggcaaccccctcctctgggacaggctttggacttggtgggggtctcgccaca
caaaccactgctgcccctgcaggaggggggttcagctttggggccgcaggagggcttgga
gcccctgttgcccaaactcagccccagacccaacctgctgcagctggtggactctcttta
ggaactcctgctgaagtcacccaaattatgggaggtgggtttagttttggtgcagccaag
gtccaggccaccacagccccagcccctactgtaaccgtaggagggggcttctcatttgga
aacagcacacctgccagcctctccctggggacccagcccacaagtctgactcttaactct
gtggcctcaacagctgtaccaaccacaacccaggttggaggattcgcttttggcgtcaaa
ccttctgctactccagccccgactgcaactgccccggctacccaagcctcattaggttct
tctctttttgctgtaccagcatcaacagcagctcctgctacagcagcaatcacaggattt
ttgggcgctgcccctacctcagctgccccggctgccacctcaacagcgggaagtaccctg
ggcttcatgctcaaacccctgggagcagtcactgccacaactactgccccagttggcaca
gtgtttgttttagctgcccctaccacaaccacaggtttctcactggctatgaaacctgcg
ggcgccattggcattggtgtaacggcccccatcactggcgtagccacaaccattgctact
gttacagcaagtgctcctccagtgatgtcatatatccaactagagggtctcattaacaag
tggagtcttgagctggaggaccaggagaggcatttcttacagcaagccacccaggtcaac
gcctgggaccgcacgctggtggagaacggagagaagatcacatcactgcacagggagatg
gagaaagtgaaattggaccaaagaaggctggaccaggaactggacttcatcctgtcacaa
cagaaggagctggaggacctgctgtccccactggaggagtctgtcaaagaacagagtgga
accatctacatgcagaacgcagacgaggaacgcgagcggacgtacaagcttgcagagaac
gtggacgcccagctgaagaggatgtcccaagatctaaaggagatcattgaacacctgaat
acatccagcgggccagctgataacagtgacccgcttcagcagatctgcaaaattctcaat
gcccacatggactctcttcaatggattgaccagaactcggtgcttctacagagaagggtg
gaggatgtgtccaaactctgtgacaaccgacgcaaagagcaggagaagacttttcgcata
acatttcattga
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