Oncorhynchus kisutch (coho salmon): 109892620
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Entry
109892620 CDS
T09179
Name
(RefSeq) nectin-3-like protein isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04514
Cell adhesion molecules
oki04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109892620
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
109892620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109892620
04090 CD molecules [BR:
oki04090
]
109892620
Cell adhesion molecules [BR:
oki04515
]
Immunoglobulin superfamily
Nectin family
109892620
CD molecules [BR:
oki04090
]
Proteins
109892620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
ig
C2-set_2
I-set
Ig_2
Keratin_assoc
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
109892620
NCBI-ProteinID:
XP_020340882
Ensembl:
ENSOKIG00005050622
UniProt:
A0A8C7LF97
LinkDB
All DBs
Position
LG6:complement(28534400..28623705)
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AA seq
566 aa
AA seq
DB search
MFLPCLRNYPLHKRQHAVFIFLLYSLTGVGGSQVLVPQKVSAVLGKNVTLGCSVEVEANL
SFTQSSWERRLPTGSVTVAVYNPVFGISIPPDYVRRLSFRSPSSHDATIVLEDVGFTDIG
VYTCKVATFPLGNTQASTTVSVLVEPKVYVSAGSVALIDEGNETVVATCIAERALPPAEV
SWETDLFGHSEVTMQDEANGTTSTQVHYLWQPTRHVQGQALTCVVRHPALHTDFRIPYQL
NVEYAPDIVVVGYDGDWHVGRESVLLTCKAKANPPAHHFRWIRLDGDMPEGVEILNSTLL
FLRPLQRNDSGVYRCEVANAINLRSRDLRIRIQDPPTTSMPSTTPAPVLTGSASSSTSVG
DKQRVLFTSPTLAALPPANQLGTIVGGAVGGALFLLLLLVLGGVCYLRQRQTFRGDYYTK
QYLGPSDMQKAPPQHELHPSKPANNVFVDKDREEWGDRERNHERDRERLHLHPTSTTIMN
SHNHREPERQSNGRTRATRNGEHHDHDHLRSYPSPHQSSHARYTAPLHPLSNGSPYLSDD
CYDSGAEGDYVSHMDGSVISRREWYV
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgccttgcctcaggaattacccgcttcataagagacagcatgctgtatttatt
tttcttctgtacagcttgacaggtgtggggggcagtcaggtgttggtgccccagaaggtg
agtgctgtattggggaagaacgtgacgttgggctgtagtgtggaggtggaggccaacctg
agttttacccagagttcctgggagcgccggctgcccacaggctcagtgactgtggcggtg
tacaaccccgtgttcggtatctccatccccccggactacgttcgccgcctgtccttccgc
tcaccctcctcccatgacgccaccatcgtactggaggacgtgggcttcacagacattgga
gtgtacacctgcaaggtggccaccttccccctgggcaacacacaggcctccaccactgtc
agcgtgcttgtggagcccaaggtgtatgtgtcggctggctcggtggctctgatcgatgag
ggcaatgagacggtggtggctacctgcatcgctgagcgggccctcccccctgccgaagtc
tcctgggagacggacctgtttggccattcagaggtgacgatgcaggacgaggccaacggc
accaccagcacccaagtgcactacctgtggcagccgacccgccacgtccagggtcaagcc
ctcacctgtgtggtgcgccatcctgccctgcacacggactttaggatcccctaccagctc
aatgtggagtatgccccagacattgtggtggtaggttatgatggtgactggcacgtgggc
cgcgagagcgtcctgctgacctgcaaagccaaggcaaacccaccagcccaccacttcaga
tggatcagactggacggggacatgccagagggggtggagatactgaacagcacgttgctg
tttctgaggcccctccaaaggaatgactctggagtctacaggtgtgaggttgccaatgcc
atcaacctacgcagcagggacctgcggatacgcatacaagatcctcccaccacctccatg
ccctccaccacccctgcgcctgtcctaactggctctgcctcctcctccacctctgtggga
gacaagcaacgggtcctcttcacctcccccaccctggcagccctgccccctgccaaccaa
ctgggcaccatcgtgggcggagctgtgggcggagccttgttcctcctgctgctgctagtg
ctgggtggggtctgttacctccgacaacgacagaccttccgcggggactactacaccaag
cagtacctagggccttcagacatgcagaaggctcctccacagcacgagctccacccctcc
aagcctgccaataacgtttttgtagacaaggaccgcgaggagtggggcgaccgcgaacgc
aaccacgagcgggaccgcgagcgcctccacctgcatccaacatcaacaaccatcatgaac
agccacaaccacagagagccagagcgccagtccaatggccgcacgagggcaacgagaaat
ggagaacaccatgaccacgaccacctgcgtagctaccccagcccccaccagagtagccat
gccagatacactgccccactacacccgctgagcaacggttccccctacttgtcggatgac
tgctatgacagtggggccgagggggactatgtctctcatatggacggctccgtgatctca
cgcagggagtggtacgtctga
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