Oncorhynchus kisutch (coho salmon): 109892649
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Entry
109892649 CDS
T09179
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109892649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109892649
Membrane trafficking [BR:
oki04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
109892649
Endosome - Golgi transport
Arf GTPase associated proteins
109892649
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
109892649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
PH_11
PH_6
PH_3
RA
Ras_bdg_2
GAP1-M
Motif
Other DBs
NCBI-GeneID:
109892649
NCBI-ProteinID:
XP_020340927
LinkDB
All DBs
Position
LG6:complement(29420937..29436091)
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AA seq
1132 aa
AA seq
DB search
MADQEDSLRAMQNCFRSQFSMEEVECEDIEASRRTSSVDEDSIYLACTLSRSYDLGDSDL
HHTPVIKMGWLDKTPPQGSLIFQKRWVMLDAQYLRYFQNEKEVYSKRIIAILFVTEVLNV
GEQKFEVVTRNRTFLFRAENNTVREEWVSVLKETIQQRRSSMEMSLMNFSFTSGQRDSGV
SLISKQGYLEMNGLRSKVYVVICADRVFLYGNAEEHSQGVGITYIEMNVGTVKSTDKRSF
NLTTFYRTFSFLAESAQQRDQWVEALQDCVSRSLSSDVVAQKIWAVEANQRCADCGAPHP
DWASVNLCVVLCKCCAGVHRGLGQSVSKVRSLRMDEKVWTDNLIQVFLLGNNRVNLFWAA
NTPPSEALQPSSDSEKRQRFVSAKYCQGKYRRYHALFGQQEALNKALCSTVQTDDVLETL
SLVFCGADVNCYTGDPELPSPVSVAQHYGQILQVEFLTHNHNTDLPGSRAGNHTLLEADL
PVSHTGYLFKTASSIRPVTECKARGDFSRRWCSLNQGNFSYYESEKSSSQSGGMKMSDVL
CLLVNPPGKHGYAHSFELYHDSGRVYLFGEDSSDKVKGWIKAIAKALVPSAAEDLVCWPF
ARVGRLSYTEGQSHHSPLLGWFSLGGSRLLLLLHGADRVENIDLRKIKELSMEQEAGAGA
VVLVDGGRSLRVEGDRRPDFQGWLSGLQQGSGRGDGPLDQQQLTDTDVPVIVDRCMSYIT
QHGLKSEGIYRRCGVNSKIAALLFFLRHDARQVRLNEGERQVDDVANVLKRFLREVGEGV
FNGHQASLPWLHTTTVSAMSERVSQYQALLHSLPRVNRATLGAVINHLYCVQCFADENQM
NMHNLAIVFGPTLFQMDGTDNSAGQVVEDLIQNYQDIFNVDAEQFQRQLDMISHVIKAQK
EHTEEGSPSPLTICGVYLERKEEGSELLVQISQEVSAEELVCKVLRRRNIPPQQGDYWSC
FLVDNNQEIERPLHYQEQALTIYFSLGKDCHLVVKKNCYMEAILTYIAGRVDVSRNGLIK
FCEEKGQRGKGTFSRRLCVLSGLSLRLYKDVKSSQPERECQINALKVYCGIKRKLQPPSC
WGMTVVCEKAVRDIQQWYLCCESKNELIEWLATFMSLQHDGDLWPAASRLDS
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaggaggattcattgcgagctatgcagaactgcttccgcagtcagtttagt
atggaggaggttgagtgtgaagacattgaagcgagcaggagaacatcatcggttgatgaa
gacagtatctatcttgcctgcacactgtcacgatcatacgacctcggagactctgatctt
caccacactcctgttatcaagatgggctggctggacaagaccccacctcaggggagcctt
attttccagaagcgttgggtgatgttggatgcacagtacctgcgatactttcaaaatgag
aaggaggtctactcaaagcggatcatagccatactgtttgtcactgaagtgcttaacgtt
ggagagcagaagtttgaggtggtgacaaggaacaggactttcttgttccgtgctgaaaac
aacactgtcagggaggaatgggtgtcagtactgaaagaaactattcagcagcgtcgtagc
agcatggagatgtcccttatgaacttcagttttactagtggacagcgtgatagtggagtc
tctctcattagtaaacaaggatacctggagatgaatggactgcgctccaaggtctatgta
gtcatctgtgctgacagggtcttcctctacgggaacgctgaggagcacagccagggtgtt
ggcatcacctacattgagatgaatgtgggtactgtgaagagcacagacaaacggtccttc
aacctcaccaccttctacagaacattcagtttcctggccgagtcggcgcagcagagggat
cagtgggtggaggccctgcaggactgtgtcagtcgctctctgtccagtgatgtggtggcc
cagaagatctgggctgtggaggccaaccagcgctgtgcagactgtggcgccccccatcca
gactgggcctctgtcaacctctgtgtggtcctttgcaagtgctgtgcaggtgtgcacagg
ggtctgggccagagtgtgtccaaagttcgcagtctgagaatggatgaaaaggtgtggact
gataaccttattcaggtgttcctgttaggtaacaacagggtaaacctgttctgggcagct
aacacgccaccaagcgaggcgctccaaccatcaagtgatagtgagaagcgccagcgcttt
gtctctgctaagtactgtcaggggaaatatcgccgctaccatgctctgtttggccaacag
gaggccctcaacaaagctctgtgcagtaccgttcagacggatgatgtattggagactctg
tctctggtgttctgtggagcagatgtgaactgttatacaggtgatccagagctgcccagc
cctgtgtccgtggcccaacactatggacagatattacaggtggagttcttaactcacaac
cacaacacagatctgccagggtctagggctggaaatcacacactcctagaggctgatctc
cccgtctcacacactggttatctcttcaagaccgcttcttcaatacggccagtaacagag
tgcaaagcaagaggagattttagccgtcgatggtgctctctgaaccaaggtaacttcagc
tactatgagagcgagaagagctccagtcagagcggcgggatgaagatgagtgatgtcctg
tgtctgttggtcaatcccccagggaaacatggttatgcccattcctttgagctgtaccat
gactctgggagagtctatctatttggagaagactcctctgacaaagtgaaagggtggatc
aaggccatcgccaaggcgctggtcccctctgcagcagaggacctggtgtgctggcccttt
gcgagggtgggtcggttgagctacactgagggccagagccaccatagccccctcctgggc
tggttctccctggggggctccagactgctcctactcctccacggagcagatcgagtggag
aacatcgacctgcgcaaaataaaggagctctccatggagcaggaggctggtgctggtgct
gtggtgctggtggacggaggcagaagcctgcgtgtggagggggacaggaggcctgacttc
cagggctggctgagtgggctccaacagggctcagggagaggagatggccccctggaccag
cagcagctcactgacacagacgtccctgtcatcgtggaccgctgcatgagctacatcaca
cagcatggtttgaagtcagagggcatctatcggaggtgtggtgtgaactccaagatcgcc
gccctgctgttctttctccgccatgacgcccggcaggtccgtctgaatgaaggggagcgc
caggtggatgacgtggcaaacgtcctgaagaggttcctcagggaagtgggagagggggtt
ttcaatggccatcaggcctctctgccatggctccacaccactactgtcagtgcgatgagt
gagagagtgtcccagtaccaggccctcctccacagcctcccccgagtcaacagagccact
ctgggggctgtcatcaaccacctctactgcgtccagtgctttgcagatgagaatcagatg
aacatgcacaacctggccattgtgtttggtcccacgctcttccagatggacggcactgat
aacagcgcaggacaggtggtagaggatctcatccagaactaccaggacatcttcaatgtg
gatgcagagcagtttcagagacagttggacatgatctcgcatgtcatcaaagcacagaag
gaacacacagaggagggaagcccctcacctctcaccatctgcggggtttacctggagagg
aaggaggagggctctgagctgctggttcagatctcccaggaagtgagtgctgaagagctg
gtatgtaaggtcctgagacgcaggaacatccctccacagcagggggactactggagctgc
ttcctggtcgacaacaaccaggagatagagcgtccattgcactatcaggagcaagcgctg
actatctatttctctctgggcaaagactgtcatctggtggtcaagaagaactgctacatg
gaggccattcttacctacatagcaggcagggtagatgtctcccgaaacggcctgatcaag
ttctgtgaagagaaaggtcaaaggggtaagggaaccttcagcagacgcctctgtgtgctc
agtggcttgtctctaaggctgtacaaagatgtgaagagttctcagcctgagagggagtgt
caaatcaacgctctgaaggtctactgtggtatcaagaggaagttacagccaccgtcatgc
tgggggatgactgtagtgtgtgagaaggcagtacgagacatacagcaatggtacctgtgc
tgtgaatcaaagaacgagttgatcgagtggctggccacttttatgagcctccagcatgat
ggtgatctgtggccagcagcttccaggctagattcctga
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integrated database retrieval system
