Oncorhynchus kisutch (coho salmon): 109892740
Help
Entry
109892740 CDS
T09179
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04142
Lysosome
oki04144
Endocytosis
oki05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109892740
04142 Lysosome
109892740
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
109892740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109892740
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109892740
Membrane trafficking [BR:
oki04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
109892740
Exosome [BR:
oki04147
]
Exosomal proteins
Proteins found in most exosomes
109892740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
TPR_ELP1
Motif
Other DBs
NCBI-GeneID:
109892740
NCBI-ProteinID:
XP_031682500
Ensembl:
ENSOKIG00005015984
LinkDB
All DBs
Position
LG6:complement(34399059..34462179)
Genome browser
AA seq
1680 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAG
AEELFARKFNNLFAGGNYSEAAKVAANAPKGILRTPDTIRKFQSVPAQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVY
LRANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTNSLTELFESFKSFEGLFYFLGSIV
NFSQDAEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKSLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRRDPDLWASV
LLETNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYME
VVQAADQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRAYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIITMM
NHPTDAWKEGQFKDIITKVANVELYYKATQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFF
SKVKQLPLVKPYLRSVQNHNNKSVNEALSNLFITEEDYQALRTSIDAYDNFDNISLAQRL
EKHELMEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLGWFLM
EDKKECFAACLFTCYDLLRPDVVLETAWKHNIMDFSMPYFIQVMREYLSKVDKLETSESL
RKEEEQATETQPIVYGTPQLMLTAGPSVPVPPQQAYGYGYQAPAGYPQAPQAQPGFGYSM
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atggctcagattctgcctatccgctttcaggagcacctgcagctccaaaacttggggatc
aacccggccaacatcgggttcagcaccctgacgatggagtctgataagttcatctgtatc
cgagagaaggtcggcgaacaagcgcaggtggtgatcatagacatggccgaccccaacacg
cccatccgcaggcctatctctgcagacagcgccatcatgaaccccgcctccaaagtcatc
gcacttaaagacgccgccaaaacccttcagatctttaacattgagatgaagagcaagatg
aaggcccacaccatgactgacgacgtcaccttctggaagtggatctccctcaacacagtg
gcacttgtgactgacaatgccgtctaccattggagcatggagggggactcccagccaatc
aaagtctttgaccggcactccagcctggcgggctgtcaaatcatcaactaccgcactgat
gccaagcagaagtggctgctgctcatcggcatctccgcacagcaaaaccgtgtggtgggc
gccatgcagttgtactctgtggacagaaaggtgtcacagcccatcgagggccacgccgcc
ggcttcgcccagttcaaaatggagggcaacacagaggagtccacactgttctgctttgct
gtgagaggacaggccggaggaaagttgcacatcattgaggtgggcaccccacccacaggg
aaccagccttttccaaagaaagcagtggatgtgttcttccctccagaggctcagaatgac
ttccctgtggccatgcagataagctccaagcaggatgtggtgttcctcatcaccaaatat
ggctacatccacctgtacgacctggagactggcacctgcatctacatgaacaggatcagc
ggggagaccatctttgtcacagccccacacgaagccactgctgggatcatcggggtcaac
aggaaaggacaggtcctgtcggtgtgtgtggaggaggagaatatcatcccctacattacc
aatgtgctccagaacccagacctggccctgcgcatggctgtccgtaacaatctagctggg
gccgaggagctgttcgcacgcaagttcaacaacctgtttgctggaggaaactactctgag
gctgccaaggtggctgccaacgcaccaaagggtatcctgcgtactccagacaccatccgt
aagttccagagtgtgccagcccagccgggccagacctctcccctgctgcagtactttggc
atcctgctggaccagggccagctcaacaagtttgagtccctggagctgtgtaggcctgtc
ctacagcaggggcgcaagcagctgctggagaagtggctcaaagaggacaagctggaatgt
tctgaggagctgggggacctggtgaagtcagtggaccccaccctggctctctccgtctac
ctgagggccaacgtacccaacaaggtcatccagtgctttgctgagaccggacagttcccc
aagatagtcctgtacgccaagaaggtgggctacactccagactggatcttcctgctgagg
aacgtgatgaggatcagtccagaacagggcctgcagttctcacagatgctggtccaggac
gaagagcctctggctgacatcacacagatcgtggatgtgttcatggagtataacctgatc
cagcagtgtacctcattcctgttggacgccctgaagaacaacaggccatctgaggggccg
ctgcagacacgcctactggagatgaacctcatgcacgccccacaggttgccgatgctatc
ctgggcaaccagatgttcacaaactacgaccgtgcccacatagcccaactgtgtgagaag
gctggcctgctgcagagggctctggagcactacaccgacctatacgacatcaagcgggcc
gtggtgcacacacacttgctcaacccagagtggctggtgaatttctttggctccctctca
gtggaggactctctagagtgcctgagggccatgttgtctgccaacatccgtcagaacctg
cagatttgtgtccaggtggcctccaagtaccacgagcagctctccaccaactccctcacc
gagctcttcgagtccttcaagagctttgagggtctgttctacttcctgggttccatcgtt
aacttcagccaggatgcagaggtccacttcaagtacatccaggctgcctgcaagacggga
cagatcaaagaggtggagaggatctgcagagagagcaactgctacgacccagaacgagtc
aagaacttcctcaaggaggccaagctcaccgaccagctcccgctcatcatcgtgtgtgac
cgcttcgactttgtccacgacctggtcctctacctgtaccgcaacaacctgcagaaatac
attgagatctatgtgcagaaagtgaaccccagccgtctgccggtggtgattggagggctt
ctggacgtggactgttctgaggacgtcattaagagtctgatcctggtggtcagaggacag
ttctccactgacgaactggtggccgaggtggaaaagaggaacaggctgaagcttctcctg
ccctggctggaggcccgtatccatgagggctgtgaggagcccgctacccacaatgccctg
gccaagatctacatcgacagtaacaacaaccctgagcgcttcctgcgtgagaacccctac
tacgatagccgcgtggtgggcaagtactgtgagaagagggacccccacctggcctgcgtg
gcctacgagagaggacagtgtgaccaggaactcatcaatgtgtgcaatgagaactccctg
ttcaagagtctgtctcgctacctggtacgtcgcagggacccggacctgtgggccagcgtg
ctgctggagaccaaccccttcagaagaccactcattgaccaggtggtgcagaccgcccta
tctgagacccaggacccagaggaggtgtcagtcacagtcaaggccttcatgactgcagac
ttgcccaatgaactcattgagctactggagaagatcgtactggataactccgtcttcagt
gaacacagaaacctgcaaaacctgctgatcctgacggccataaaggcggaccgtacccgt
gtgatggagtacatcaaccgcctggataattatgacgccccagacatcgccaacatcgcc
atcagcaacgagctcttcgaggaggcattcgctatcttcaagaagtttgacgtcaacaca
tccgctgtgcaggttctgattgagcacattgggaacctggaccgggcctatgagttcgcc
gagcgttgcaacgagccggccgtgtggagccagctggccaaggctcagctgcagaagggc
ctggtcaaggaggccattgactcctacatcaaggctgacgacccctctgcctacatggag
gtggtacaggccgccgaccagagtggtaactgggaggacctagtgaagttccttcagatg
gcccgtaagaaggcccgggagtcctatgtggagacagagcttatctttgccctggccaag
accaaccgcctggctgagctggaggagttcatcaacggacccaacaacgcccacatccaa
caggtcggcgaccgctgttatgacgagaaaatgtacgatgcggccaagttactgtacaac
aacgtgtccaacttcggccgcctggcgtccaccctggttcacctcggagagtaccaggcg
gcggtagacggggcgcgcaaggccaacagcactaggacctggaaggaggtgtgcttcgct
tgcgtggatgggaaggaattccggctggcccagatgtgtggcctccacatcgtggtgcat
gctgatgaactggaggaactcatcaactactaccaggaccgtgcttactttgaggagctg
atcaccatgctggaggcagccctggggctggagcgggctcacatgggcatgttcactgag
ctggccatcctctactccaaattcaaaccccagaagatgagggagcacctggagctcttc
tggtccagagtcaacattccgaaggttctgcgggcggcggagcaggcccacctgtgggcg
gagctggtgttcctgtacgataagtacgaggagtttgacaatgccatcatcactatgatg
aaccaccccacagacgcctggaaggagggccagttcaaagacattatcaccaaggtggcc
aatgtggagctgtattacaaagcaactcagttctatttggagttcaagccgttgttactg
aatgacctgctcattgtgctgtcccccagactggaccactcccgggctgtcaacttcttc
agcaaggtgaaacagctgcccctggtcaagccctacctgcgctcagtacagaaccacaac
aacaagtctgtcaatgaagcacttagcaacctcttcatcacagaggaggactatcaggct
ctgaggacgtctatagatgcttatgacaacttcgacaacatctcgctggcccagcgcctg
gagaaacacgagctgatggagttcaggagaatcgctgcgtacctcttcaagggtaacaac
cgctggaaacagagtgtggagctctgcaagaaggacagactctacaaggatgccatgcag
tacgcgtcagagtctaaggacacggagctggctgaggagctgctgggctggttcctgatg
gaggacaagaaggagtgctttgccgcctgccttttcacctgctacgacctgctgaggcca
gacgtggtgctggagactgcctggaagcacaacatcatggacttctccatgccctacttc
atccaggtcatgagagagtacctctccaaggtggacaagctggagacctccgagtcccta
cggaaagaggaggagcaggcgacagagacccaacccatagtctatggcacaccccagctg
atgctgactgctggccccagtgtgcccgtacccccccagcaggcctatggctatggttac
caggcccctgcgggctatccccaggctcctcaggcacagccaggcttcggctacagcatg
tga
DBGET
integrated database retrieval system
