Oncorhynchus kisutch (coho salmon): 109892763
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Entry
109892763 CDS
T09179
Name
(RefSeq) CCR4-NOT transcription complex subunit 8
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109892763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109892763
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109892763
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109892763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
EKR
Nore1-SARAH
Motif
Other DBs
NCBI-GeneID:
109892763
NCBI-ProteinID:
XP_020341117
Ensembl:
ENSOKIG00005027451
LinkDB
All DBs
Position
LG6:36036904..36040645
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AA seq
285 aa
AA seq
DB search
MPAALADTSQIICEVWASNVEEEMRKIRQIIQSYNSIAMDTEFPGVVVRPIGEFRSTVDY
QYQLLRCNVDLLKIIQLGLSFMNEDGDYPPGTTTWQFNFKFNLTEDMYSQDSIDLLQNSG
LQFKKHEEEGIDTLYFAELLMTSGLVLCENVKWLSFHSGYDFGYLVKLLTDTRLPEEEHE
FFQILNLFFPAIYDVKYLMKSCKNLKGGLQEVADQLELKRIGRQHQAGSDSLLTGMAFFR
MKELFFEDNIDDAKYCGRLYGLGSGSTQNQNGISSSSQEETNNKH
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgcacttgcagataccagtcagattatctgtgaggtctgggcaagcaatgtg
gaggaggaaatgaggaaaatccgacagataattcaaagctacaactccattgccatggac
acagaattccccggagtagtagttcgaccaattggcgagtttcgcagcacagtagattac
cagtaccagctcttgaggtgcaacgtggaccttctgaaaatcatccaattgggactgtcg
tttatgaacgaggacggagactatcctcctggaacaacaacatggcagttcaatttcaaa
tttaatttaacagaggatatgtactcccaggactcaatagacctactccagaactccggc
ctccaattcaaaaagcacgaggaagaggggatcgacacactttactttgctgagctcctg
atgacatctggtttagtgctgtgtgaaaatgtcaagtggctctcctttcacagcgggtat
gattttggctacctggtgaagctcttaacggacactcgcctacctgaggaggaacatgag
ttcttccagatcctcaatctcttcttccctgcaatctatgatgtgaaatatctgatgaaa
agctgtaagaacttaaagggaggactccaggaggtggctgaccagctggaactgaaaagg
attgggagacagcaccaggccggttccgattcactgctcacagggatggcattctttagg
atgaaagagcttttctttgaagacaacattgatgatgcaaagtattgtgggcgattgtat
ggattgggctctgggtccactcaaaatcagaacggcatctcaagctcttcccaagaggaa
actaacaacaagcactga
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