Oncorhynchus kisutch (coho salmon): 109892787
Help
Entry
109892787 CDS
T09179
Name
(RefSeq) matrix metalloproteinase-28 isoform X1
KO
K08006
matrix metalloproteinase-28 (epilysin) [EC:3.4.24.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oki01002
]
109892787
Peptidases and inhibitors [BR:
oki01002
]
Metallo peptidases
Family M10
109892787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Peptidase_M57
DUF4953
Reprolysin_4
Reprolysin_3
Reprolysin_5
Peptidase_M66
DUF92
Reprolysin_2
Peptidase_M54
Motif
Other DBs
NCBI-GeneID:
109892787
NCBI-ProteinID:
XP_020341153
Ensembl:
ENSOKIG00005037255
LinkDB
All DBs
Position
LG6:37529548..37548374
Genome browser
AA seq
543 aa
AA seq
DB search
MRTCVVVVGKMNILPEKTLRTFVLQLSCVLLTLKATVTVGSPVLLNLPSTPETSAETFLE
KYGYLEEESHQHNDTEVNTALREFQWLTHLPVTGRLDSDTRHQMAEPRCGVRDDRGQQAW
AQKVNGIFHGGLTKPNSGQRLRRKRHSQLGERWHKRHLTYQVVNWPGHLPRGQVALAVRT
AFQLWSNVSALAFREVTQGSADIRLAFYEGDHNDGMGNAFDGPGGALAHAFFPCRGEAHF
DMAERWTLNGYKGHNLFMVIAHEVGHTLGLEHSPVRHALMSPYYKKLGKATVLSWDDITA
VQQLYGKPESGQVIQLPGQVFSSALRDWELSEGGTWKPDSTPPPYCRGFFDALTMDQDGT
SLVFRGGLFWTVSPAGKTSSPLPLQNRWPGLPLAIEAAAYSQMDNKFYFFKGRRVWRYSS
SGVDPGFPLRSSELGLPGHPDQAFYYPRLGHLVVFKGQLYFVLNLGTLRPEPYYPRSLDD
WRGVPRGTNGAVSHPDGQVYFFKERHYWRFDPEKVQVTGEGMWDTELEWAGCLGTHHRGN
NIL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaggacttgcgttgtcgttgtcggcaagatgaacattttacctgagaaaactttgagg
acattcgtgttgcaactttcttgtgtgctgctcacgttgaaggcaaccgttaccgttggc
tcacctgtgctgctaaatctcccgtcaacacctgagactagtgctgagacttttctggag
aagtatggataccttgaggaggagagtcaccaacacaatgatactgaggtcaacacagct
ctcagggagttccagtggctcacccacctgccagtcactgggcgtctggacagtgacaca
cggcaccagatggcagagcccaggtgtggggtgagggatgacaggggccagcaggcctgg
gcacagaaggtcaacggcatcttccatggaggtctgaccaaacctaacagtggacagcgt
ctacgcaggaagcgccatagccagctaggtgagaggtggcacaagcgtcacctgacctac
caggtggtgaactggcctggccacctccctcggggtcaggtggccctagccgtacgcacc
gctttccagctgtggagtaacgtttcggccctggccttcagagaggtcacccaggggtca
gctgacatccggctggccttctacgagggggaccacaacgacggtatgggcaacgccttt
gatggtccaggaggcgccctagcacatgccttcttcccatgccgaggggaggcccacttt
gacatggcagagcgctggacactgaacggctacaagggccacaacctgttcatggtcatt
gcccacgaggtgggccacacgctgggcttggagcactctcctgtgcgccacgctctcatg
tccccctactacaagaagctggggaaagccacggtgctgagctgggatgacatcactgct
gtacagcagctctatgggaagccagagagcggtcaggtaatccagttgcctggtcaggtg
ttcagctctgctctacgggactgggagctgtctgaaggtggtacttggaagcctgattcc
accccacctccatactgcaggggattctttgatgctctcaccatggaccaagatggtacc
agcctagtattccgtggggggctgttctggactgtgtctcctgcaggcaagaccagctcc
cctctacctctgcagaaccgctggccaggactacccctcgccattgaggcagctgcttac
tctcagatggacaataagttctactttttcaaaggtaggcgagtgtggcgttactccagc
agtggtgtggacccgggcttccccctgaggagcagtgagctgggcctccctggacaccct
gaccaggccttctactaccctcgcctgggacacctggtggtgttcaagggccagctctac
tttgtgctcaacctggggaccctgaggcccgagccatactacccccgcagtttggatgac
tggaggggtgtcccccgggggaccaacggagccgtcagccaccctgatggacaagtgtac
ttcttcaaggagcggcactactggagatttgatccagagaaagtgcaggtgactggagag
gggatgtgggacacagagctggagtgggcaggctgtttgggcactcaccacagaggcaat
aatatactgtga
DBGET
integrated database retrieval system
