Oncorhynchus kisutch (coho salmon): 109892847
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Entry
109892847 CDS
T09179
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10 isoform X1
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oki03009
]
109892847
Enzymes [BR:
oki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109892847
Ribosome biogenesis [BR:
oki03009
]
Eukaryotic type
90S particles
Helicases
109892847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SecA_DEAD
PAS_11
Motif
Other DBs
NCBI-GeneID:
109892847
NCBI-ProteinID:
XP_020341251
Ensembl:
ENSOKIG00005046753
LinkDB
All DBs
Position
LG6:complement(39911915..39978455)
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AA seq
858 aa
AA seq
DB search
MEKGKRPNVSPNKKIRKKNPTDTIDPVKNFERWKKKYNKTKTRVKREKRQKRRPEWQVEK
EAIQRLVNKYNEINAKDAETFSDFPISKNTLRGLMEAQYRQPTEIQRQTIGFALQGKDVL
GAAKTGSGKTLAFIIPVLECLYRQQWTAMDGLGALIISPTRELAYQTFEVLRKVGKNHEF
SAGLIIGGKDLKNESEKIHRTNIIICTPGRLLQHMDETAAFHASDLHMLVLDEADRILDM
GFADTINAIVENLPKTRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLEQ
NYVVCELHQKVNMLFSFIRSHLQKKIIVFFACCKEVQYLFRVFCRLRPGMPILALHGKQQ
QMKRVEVYNDFIKKKNAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRVGRTARYK
EGGEALLVLLPSEEKDMLSQLQVKKVPINRIQVNPEKLTSVQQKLEAFLAQEKEQKERAQ
RCFVSYLRSVYLMKNKDVFDVFQLKLQEYAASLGLAVAPRVRFLNKVQKQRADPGQSGGP
GDVAPHEEEKELKSFKAQLRGDGLKSEAQESQSSDEEDDEGEEKLQPGPKGLIFGADETE
EDEDMRDLDLLTVKRKDVFSLEEVDQDDEETDSNTIKKTEKETKFKEAKKVLKRNFQVNT
KLVFTEDGQMVQQWPPLQRTAVPATEGEDEDCTSGINVEEARERLRREDQEFDKLEYRRK
VKEKHREKRLKENAARREASKQYAEEQKSGEEDEEEVVAYLGGSDGEEFDPSTLPDPDKL
HYDSEEDDDQISPAAGTRKRIRSDRIDDSGEEEEEEEEEAAAGSRKRPRQQATAKPLDTG
LSLAEDEALVLHLLGNRS
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggagaagggcaaacgaccaaacgtgtcccccaataaaaaaataagaaagaaaaaccca
accgacactattgatccggtgaagaacttcgagcgatggaagaagaaatacaacaagacg
aaaacacgagttaaacgagagaaaagacagaaaaggagacctgaatggcaggtggagaaa
gaagctattcaaaggcttgtcaacaaatataacgagataaatgccaaggatgctgagacg
ttttcagatttccccatctcaaagaataccctgcgaggtctgatggaagcacagtatcgt
cagcccacagaaatacagagacagaccattggctttgcgttgcaaggtaaagatgttctg
ggtgctgcaaagacgggctctggaaaaacactggcctttatcattcctgtattggagtgt
ttgtatcgtcagcagtggacagccatggatggcctgggggccctcatcatctccccgaca
cgagagctggcctatcagaccttcgaagtactccgtaaagtgggcaagaaccacgagttc
tctgccggcctcatcattggcggaaaggacctgaaaaatgagtctgagaagatccaccgc
accaacatcatcatctgcacgccaggacgcctgctccagcacatggacgagactgctgcg
ttccacgcctccgatctgcacatgctagttttggatgaggcggatcgtatcctggacatg
ggttttgccgacactatcaatgccatagtggagaacctccccaagacccgtcagacactg
ctgttctcagccacacagaccaagtcagtgaaagacctggcccgcctcagcctcaaagac
ccagagtacgtctgggtgcacgagaaggccaagttcagcacgccggccacgctggagcag
aactacgtggtgtgtgagctgcaccagaaagtcaacatgctcttctccttcatcaggagc
cacctgcagaagaaaatcatcgtcttcttcgcctgttgcaaagaggtgcaatacctgttc
cgggtgttttgtcggctgcgtccgggcatgcccatcctggccctgcatgggaagcaacag
cagatgaagagggtggaggtctacaatgacttcatcaagaagaagaatgctgtgctcttc
gccacagacattgcagccagaggcctagacttccctgccgtgaactgggtgttgcagttt
gactgtccagaggatgccaacacatacatccacagagtgggacgaaccgccaggtataag
gagggaggagaggctctgcttgttctgctgccctcagaagagaaggacatgctatctcag
ctccaggtgaagaaagtccccatcaacagaattcaggtgaacccagagaagctgacgagc
gtgcagcagaagctggaggctttcctggcccaggagaaggaacagaaggagcgagcacag
aggtgtttcgtctcctacctgcgctctgtctacctcatgaaaaacaaagacgtctttgat
gtgttccagctcaagctccaggagtatgcagcttctctgggcctcgctgttgctccaagg
gtgcgttttctcaacaaagtccagaagcagagagcagaccctggacagagcggcgggccg
ggagatgtggccccgcatgaggaggagaaggaactaaagagcttcaaggctcagctcaga
ggagacgggctcaagtccgaagctcaagaatcccaaagctcagatgaggaagatgatgag
ggggaggaaaagttacagcccggtcctaagggtctcatcttcggggcagatgaaaccgag
gaggatgaagatatgagggacttggacctgctcacagtgaagagaaaagatgtcttcagc
ctggaggaagttgaccaggatgatgaggaaactgacagtaacaccattaagaaaacagaa
aaagagaccaagttcaaagaggccaagaaagtcctgaagagaaacttccaagtcaacacc
aaattagttttcactgaagacggacagatggtgcagcagtggcccccgctccagaggacg
gccgtgccagccacagagggggaggatgaggactgcacgtcgggcatcaatgtggaggag
gccagagagaggctgcgccgagaggaccaggagtttgacaagctggagtacaggcgtaaa
gtcaaagagaaacacagggagaagagactgaaggagaacgctgccagaagagaagccagc
aagcagtacgctgaggagcagaagtccggtgaggaggatgaagaggaggtggtagcgtac
ctgggcggttctgatggagaagagtttgaccccagcacactgccagacccggacaaacta
cactacgactcggaggaagatgatgaccagatcagccctgctgctgggacgaggaagcgc
atccgcagtgaccgcatcgatgactcgggtgaagaagaggaggaggaggaggaggaggcg
gcagcggggagcaggaagagacccaggcaacaagcaaccgccaagcccctggacactggc
ctctctctggccgaggacgaagcactggtcctgcatctgctggggaaccggagctag
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