Oncorhynchus kisutch (coho salmon): 109892867
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Entry
109892867 CDS
T09179
Name
(RefSeq) roundabout homolog 1 isoform X2
KO
K06784
roundabout, axon guidance receptor 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109892867
Cell adhesion molecules [BR:
oki04515
]
Immunoglobulin superfamily
ROBO family
109892867
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_6
C1-set
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
109892867
NCBI-ProteinID:
XP_020341299
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Position
LG6:complement(42708487..42736099)
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AA seq
1133 aa
AA seq
DB search
MTEQVFIRMLVVFAALGNLAGSRLRAEVVEVTPLIVHHPSDVVVKVGSPATLSCRAEGTP
EPSIEWLRNGQPMEMDKLDSQSRPIVLSEGSLFFLSVVPGRRSQSHEGVYACVAKNSAGK
ATSRNASLYIAALREDFRVQPGDVEVAVEEVVVMNCSPPVGHPEPNVTWRKDGVPINNTD
PHYTALNGKLIIAPAQKNDSGVYICVASNTVGVRVSRAARLSVLAKPVLVLKPQDVSVGM
GESAQFYCEAKGDPMPAVEWIREQGPLPNGRYLVNPDQSLQIHYVTSLDSGRYTCTAVND
VGMVTASAQLVVEEASSTRQRDLHRELSALRVALENVTVLTPNSNMSQVQWKLQSFPTQP
HYLDGFEVLYRSLLPASSDWAAKRVVLPNFQTLVGPLKRGYKYEFKVRPYGSSLYGRESN
TRHLGVPETVPSAPPQAISITMTPDHNDTVHVTWKPPPHESHNGIIKGYQVWCVQSEEQQ
YLNWTVGGGTYSLEISPLYPGKQYWVRVATVNGAGVGVQSDPHRVVIDSQRSGAPQSDSP
SRDLTQVLTFLRGPVFIGSVGALLWCILVITAVCLYRRHTRPGDHLGRGHIKAKGLYRLA
SEDLIIKHRMAAPDSPWISGVWRPTLSDEKYQGLWAQSQENPGFRRTTLPITAKKDPSSL
DVAVPIVPDSCGVYGTFYVDLTGNGLKTFNSPARCPKRPHCHTTTSSQHCATTVCISQPA
TVVKTMLVQGGQALPWKQALPSQPKMGVLKESWENNYKQDLHAVNSAPLLSSRSQALAMR
GMPYTQRLSHLPPAGRSECFKPLESPRLLHYSASAQLVDMLPLPLAMGDTTDTHSLTSEE
GSSRSTKLTVDARSLQSVCSASGHHGPPTNTNTTTTGCPSYSCLSTASYCMSLDEEQDAT
MTSQEVTQYLELSPRAEKHSTTLENPPASSLSRTFSPTPTLGYIYGPLPSDQLEDGMTDE
QEPMGPRRARFQSTPSSLCSEWEGSLWNGWGSVSEGNMAYSTRNSFISSSDGSFMNDSNF
ARVLDTVAAESMSEASFSDFSPPASPLSALFPPAQGEEEECFGELDPMPVWDWSTAWVEE
MEAQYRAQYPSQAAAPACNTWGRCRDDLHYDNRRATGGSRGEGRGGVRTTPHR
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgacggaacaggtgtttataagaatgttggtagttttcgcagctcttggaaaccttgca
ggttccaggctgagggcggaggtagtggaggtaaccccgctgatcgtccaccacccctca
gacgtggtggtcaaggtaggcagccctgccaccctctcctgccgtgccgaaggcacaccc
gagccctccatcgagtggctccgcaatggccagcccatggagatggacaagctggacagc
caatcgcgacccatcgttctgtcagagggcagcctgttcttcctcagcgtggtccctggg
aggaggagtcagtcacacgagggtgtgtatgcgtgcgtggcaaagaacagcgcaggcaag
gccaccagccgcaatgcctccctctatatcgcagctctccgtgaagacttccgggtgcag
cccggtgatgtggaggtggctgttgaggaggtggtggtgatgaactgcagcccgccggtg
ggacaccccgaacccaacgtcacctggaggaaagacggggtccccatcaacaacactgac
ccgcattacactgcgctgaatgggaagttgatcattgccccagcccagaagaatgactct
ggcgtgtacatctgtgtggcttccaacacagtgggagtaagagtgagcagagctgcccgc
ctttctgtcctagctaagccagtgttggtgctgaagcctcaggatgtgtcggtggggatg
ggggagtctgcccagttctactgcgaggcaaaaggagaccccatgcctgctgtggagtgg
atccgcgagcagggccctctgcccaacggcaggtatctagtgaatcctgaccagagcctc
cagatccactatgtgacgtcactggattctgggaggtacacctgcacagctgtcaacgac
gtggggatggtcaccgccagtgcacagctagtggtggaggaagcctcaagtaccagacag
agggaccttcacagagagttgtcggccctgcgcgtggctctggagaatgtgacggtgctg
actccaaactccaacatgtcccaagtgcagtggaagctccagtctttcccaacccagcca
cactacctggatggtttcgaggtcctctatcgctctcttctgcccgccagttcggactgg
gcggctaagagggttgtactaccaaacttccaaacactggtcggcccgctcaagaggggc
tacaagtatgagttcaaagtgcgtccctacggcagcagcctgtacggccgggagagcaac
accaggcacctaggtgtacctgagacagtgcctagtgccccacctcaggccatctccata
acgatgacccctgaccataatgacacggtccatgtgacctggaagcctcccccccatgaa
tctcacaacggcatcatcaagggataccaggtgtggtgtgtgcagtcggaagagcagcag
tacctgaactggacagtgggcggtgggacctacagtctggaaataagccctctgtaccca
gggaaacagtactgggtccgggtggcaacggtcaacggagctggcgtcggggtgcagagt
gacccccatagagtggtcatagactcccagaggtccggggccccccagtcggacagcccc
agtagggacctcactcaggtcctgacctttctgaggggcccagtgttcattgggagtgtt
ggcgccctcctgtggtgcatcctggtgataacagccgtctgcctgtaccgccgccacacc
cggcctggcgaccacctgggacgaggccacatcaaggctaaaggtttgtacaggttggcc
agtgaggacctcatcataaaacacagaatggcggccccagactctccgtggatctcgggt
gtgtggagaccgaccctgagtgacgagaagtaccagggactgtgggctcagagccaggag
aaccccggcttcagaaggactacgttgcccatcacagccaagaaggaccccagctctctg
gacgtggctgtccccattgtgcccgacagctgcggtgtctacgggacgttctacgtggac
ctgacgggtaatggcctcaagaccttcaacagccctgcccgatgccccaagcggccccac
tgccacaccaccacctcctcgcagcactgcgcaacgacggtgtgcatctcccagcctgcc
acagttgtcaagaccatgcttgtccagggtggccaggcattgccatggaaacaggccttg
ccctcgcagcccaagatgggcgtgctcaaggagtcgtgggaaaataattacaagcaagat
ctccatgcggtgaacagcgcccccctgttgtcgtcgaggagccaggcgttggctatgagg
ggaatgccttacacacagagactcagccacctcccaccagctgggcgctcagagtgcttc
aagcccctggagtcaccccgcctcctgcactactctgcctcagcgcagctggtggacatg
ctgccactcccgctagccatgggcgacaccactgacacacacagcctcacctcagaggaa
gggtccagcaggtccactaagctgactgtagatgccaggtctcttcagtctgtgtgttct
gcgtctggtcaccacggcccccccaccaacactaacaccaccaccactggctgcccctcc
tatagctgcctgtccactgcctcctactgcatgtcattggatgaggagcaggatgcaacg
atgacctcacaggaagtcacccagtacctggagctcagcccaagggctgagaagcacagc
accacgttggagaatcctcccgcttcctccctatctcgcaccttttcccccactcccacc
ctgggctatatctatgggcccctcccctccgaccaactggaggacgggatgactgacgaa
caggagccaatgggcccccggcgggcccggtttcagagcacgccctcgtcgctctgcagc
gaatgggagggttcgctgtggaacggctggggctcggtgtcagagggaaacatggcgtac
agcacccgcaacagcttcatcagctcgtcggatggctcattcatgaacgactccaacttt
gcccgcgtgctcgacactgtggccgccgagtccatgagtgaagcctccttctcagacttc
tctcccccggcgtcgcccctcagtgccctgtttcctccagctcaaggggaagaagaggag
tgtttcggggagctggaccccatgcccgtttgggactggagcacagcttgggtggaggag
atggaggcgcagtaccgtgcacagtacccctctcaggcagcagcccccgcttgcaacacc
tgggggcgttgccgtgacgatcttcactatgacaaccgccgagccaccggagggagtagg
ggtgaaggacgagggggggtgaggacgaccccacaccgatga
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