Oncorhynchus kisutch (coho salmon): 109892886
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Entry
109892886 CDS
T09179
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein L isoform X1
KO
K13159
heterogeneous nuclear ribonucleoprotein L
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109892886
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
109892886
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_10
RRM_occluded
RRM_3
DUF4523
Bacteroid_pep
Motif
Other DBs
NCBI-GeneID:
109892886
NCBI-ProteinID:
XP_020341335
Ensembl:
ENSOKIG00005004397
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All DBs
Position
LG6:complement(44618806..44627663)
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AA seq
559 aa
AA seq
DB search
MAAAAGRYYNEGGRATKRQKTEDGMTTEGYDDPHKTLPSPVVHIRGLVDGIMEADLVEAL
QEFGTISYVVMMPKKRQALVEYEDMNGSCNAVTYAAENQVYIAGHPSFINYSTSQKISRP
GDPDDSRSVNNVLLLTIMNPIYPITSDVLYTVCNNCGPVQRIVIFRKNGVQAMVEFDAVQ
SAQRAKASLNGADIYSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNPSGHDADAEGNWN
NSQDPNANPNKRARPPALLGDHPPEYGGPTGAYHGYHDESGYGPPPPHYEGGRRMGPPMG
GRGRGRGGSYGGPGYGHGPPPPGDYTAHADSPVVMVYGLEPAKINADKVFNVFCLYGNVE
RVKFMKSKPGAAMVEMGDCYAVDRAISHLNNNFLFGQKLNVCVSKQQAIMPGQSYELEDG
SSSFKDFHGSRNNRFTSPEQAAKNRIQHPSNVLHFFNGQPDISVEVFNGVCEELGVKNPS
SIKLFTGKSGATGERSSSGLLEWESINDSMEALAMMNHYQMKNPSKYSDCDNNTTANDTN
GGPYPYTLKLCFSTAQHAN
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcagcaggtcgctattacaacgagggtggcagagcaacgaaaagacagaaa
accgaagacgggatgacgacggagggctatgatgacccccataaaacactcccttcccca
gtggtccacatcaggggccttgttgatggcatcatggaggcagatctagtggaagccctg
caggagtttgggaccataagttatgtggtcatgatgcccaagaagcgccaggccctggtg
gagtacgaggacatgaatggatcctgcaatgctgtgacctatgcagccgagaaccaggtc
tacattgccgggcacccctccttcatcaactactccaccagccagaagatctcccggccc
ggagacccagacgactcgcgcagcgtcaataacgtgctgctgctcaccatcatgaacccc
atctaccccatcacctcggatgtgctgtacacagtctgtaacaactgtgggcccgtccaa
aggattgtcatcttcaggaagaatggcgttcaggccatggtggaatttgatgctgtacaa
agtgcccagagggcaaaagcctctctaaatggggccgacatctactctggctgctgcaca
ctgaagattgagtatgccaagccaacccgcctcaacgtgttcaaaaatgaccaggacacc
tgggactacacaaaccccaacccgagtggccacgatgctgacgctgaaggcaattggaac
aattcacaagatcccaatgccaaccccaacaagcgtgcgaggccgccagctctactagga
gaccaccctccagagtatggtgggccgactggtgcttatcacggctaccatgatgaaagt
ggctatgggccccctcctcctcattatgagggcgggcgccgcatggggcctccgatggga
gggcgtggccgcggacgtggtggaagctacgggggacctgggtatggacatggcccacct
ccccccggtgactacaccgcccacgcggactcccctgttgtcatggtgtacggcctggag
cccgcgaagatcaacgccgacaaggtcttcaacgtcttctgtctctacggcaatgtggag
cgggtgaagttcatgaagagtaagccgggggcagccatggtggagatgggcgactgctac
gctgtggaccgtgccatcagccacctcaacaacaacttcctgtttggacagaagctcaac
gtctgtgtgtccaagcagcaggccatcatgcctggtcagtcctatgaactggaggacggc
tccagcagcttcaaggacttccacggctcccgcaacaaccgcttcacctccccggagcag
gcggcaaagaaccgcatccagcatcccagcaacgtcctgcacttcttcaacgggcagccc
gacatctccgtggaggtcttcaatggggtctgtgaggaacttggtgtgaagaacccatcc
agcatcaaactcttcactggaaagagtggcgcgacaggtgagaggagctcatccgggctg
ctggagtgggagtctataaacgattccatggaggctctggccatgatgaaccactaccag
atgaagaaccccagtaagtactccgactgcgataacaacaccaccgctaatgataccaac
ggtggtccgtacccttacacactgaagctgtgtttctcaactgcgcagcatgccaactag
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