Oncorhynchus kisutch (coho salmon): 109892952
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Entry
109892952 CDS
T09179
Name
(RefSeq) lymphoid enhancer-binding factor 1-like isoform X1
KO
K02620
transcription factor 7
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04310
Wnt signaling pathway
oki04520
Adherens junction
oki04916
Melanogenesis
oki05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109892952
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
109892952
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
109892952
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109892952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109892952
Transcription factors [BR:
oki03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
109892952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109892952
NCBI-ProteinID:
XP_031682751
Ensembl:
ENSOKIG00005033777
UniProt:
A0A8C7IXU0
LinkDB
All DBs
Position
LG6:complement(50416460..50485991)
Genome browser
AA seq
508 aa
AA seq
DB search
MPQLSSGGGDDLGANDEMISFKDEGDQDEKIQENAFTERDLADLKSSLVNESETNQSPNA
AAVRRGQQNEHRGYQEKHREHLDGVSKHQDGGMYKTAYPGYPFLMLPDPYIPNGSMSPSS
NKVSVVQQSHGMHPLTSLLPYSNDHFNPSPPHLPTDMSQKGVHRPQSQDISGFYSLPQGG
VGQMPPSMGWQSQPVYPLSSCGFRQPYSSSLPNSSSYPRFSHSLMLGPGMHSTGIPHPAI
VPPSGKQDHYDRNVYAKPHQEPKREKEPKKPVIKKPLNAFMLYMKEMRAKVIAECTLKES
AAINQILGRRWHALTREEQAKYYELARKERQLHMQLYPSWSARDNYEAGLREGAGEKNKA
DWGKKKRRKREKQQDSTTDPGSPKKCRARFGLNQQTDWCGPCRRKKKCIRYLQGGWCASP
TSSDGSAIDSPPSPVDGVPPQHPSLPSSPSPASPSHIPLHPKPSKQHTPRILSKPKTTEL
SLKALIESSQQHDNLHHHHHDCTLPKSH
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagctcagcagcggcggaggagatgatctcggagcgaacgatgaaatgatatcc
tttaaggatgaaggcgatcaagatgagaaaattcaagaaaacgctttcacagaaagggac
ttagctgacctcaagtcgtctctggtgaatgaatccgagacgaatcaaagtccgaacgca
gcggcggtcagacggggacagcaaaacgaacacagaggttatcaagagaaacaccgggag
catctcgacggcgtttccaaacatcaagatggaggaatgtacaaaacagcgtatccgggg
tacccgtttctcatgctgcctgacccatacatccccaacggatcaatgtccccatcttcc
aacaaagtttcagtggtccagcaatctcacgggatgcaccccctgacgtccctgttgccg
tacagcaatgaccacttcaaccccagcccccctcacctgcccacagacatgagccagaaa
ggcgttcacaggccccagtcccaggatatctcaggcttctactccctacctcagggcggt
gtgggacagatgcccccctccatgggctggcaaagtcagcctgtctatcccctgtcctca
tgtggattcagacagccctactcctccagtctccccaacagctcttcctaccccaggttc
tctcactctctgatgctagggccaggcatgcactcaacagggatcccccatccagccatc
gtgccaccttcaggcaaacaggaccattacgacaggaacgtgtacgctaagccacaccag
gagcccaagcgggagaaggagcctaagaagccagtgatcaagaagcctctgaatgctttc
atgctgtacatgaaggagatgagggccaaggtgatcgctgagtgcacgctgaaggagagc
gctgccatcaaccagatacttggcagaaggtggcacgctctgacccgggaggaacaggct
aaatactatgagctggccaggaaggagcggcagctacacatgcagctctaccccagctgg
tccgccagagacaactacgaggcgggccttagagagggcgcgggggaaaagaataaagct
gattggggcaagaagaagagaagaaaaagagagaagcagcaggactccaccacagaccct
ggctctcctaagaaatgcagagctcgcttcggcctcaaccaacaaacggactggtgtggt
ccctgcaggaggaaaaagaagtgcattcgataccttcaaggaggatggtgcgccagcccc
acttcttccgatggaagcgctatagactcgcccccctcccccgtcgacggcgtcccccct
cagcacccctccctgcccagctcgccctcgcctgcttccccctcacacatccctctgcac
cccaagcccagcaaacaacacacaccccgtatcctctcaaaacccaagaccacagaactc
tctctcaaagctttaatagaatcatcccaacagcacgacaatctccatcatcatcatcat
gactgtaccctgcccaagtctcactag
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