Oncorhynchus kisutch (coho salmon): 109892960
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Entry
109892960 CDS
T09179
Name
(RefSeq) PDZ and LIM domain protein 4-like
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109892960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109892960
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
109892960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
SNAPC3
PDZ_2
Motif
Other DBs
NCBI-GeneID:
109892960
NCBI-ProteinID:
XP_020341475
Ensembl:
ENSOKIG00005048481
UniProt:
A0A8C7L104
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All DBs
Position
LG6:complement(51530561..51591859)
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AA seq
376 aa
AA seq
DB search
MPHTVTLNGPSPWGFRLVGGRDFSTPLTISRVTPGSKAAQGDLCPGDTILVINGDNTETM
THMEAQNRIKACIGELTLAICRSGDKVWSPNVIEDGKTSPYMATLESESPQNFRPISTGP
MTSGYSSSYSRGSNSSGYSRKPSYTPELPHLNNGTSKQSNHAQYNNPASLYAHNNGSNGD
RDRVLPKQMSGLSLGSPHSPEPPMRSPMGRNGNGHSFEVTTESDVYKMLQDTEEPVSAPK
QSGSFKYLQGILEAEDGGVSPTDMSGVRGLRSPDRSPVPKLGSPTPGHMGPMPGLQKLPQ
CTRCGNGIVGTIVKARDKLYHTECFMCDDCGMNLKQRGYFFIEENLYCETHAMARVQPPE
GYDVVAVYPNSKVELV
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgccccacaccgtgacattgaatggaccctcaccttggggttttcgactggtcggtgga
agggacttcagtacaccgttaactatttcgagggtgacaccgggcagtaaggcagcacaa
ggggacctgtgtcctggagacaccatcctggtcatcaatggggacaacacagagaccatg
acacacatggaggcccagaacaggatcaaggcctgcattggggagctcacactggccatc
tgcaggtcaggagacaaagtctggtctccaaatgttattgaagatggcaagacaagtcca
tacatggccacattggagtctgagtcaccacagaatttccgacccattagcactggacca
atgaccagtggttacagcagcagctacagcagggggagcaacagcagcggttacagccga
aaaccctcctacactcccgagctgccgcacctcaacaacggcacctccaagcagtccaac
catgcgcagtacaacaacccagccagcctgtacgcacacaacaacggcagcaacggagac
agagacagggtcttgccaaaacaaatgagcggcctgagcctagggtctcctcacagccct
gagcctccgatgcgttctcctatgggccgtaatggaaacggtcatagttttgaagtcacc
acagagtcagatgtgtacaagatgctgcaagacacagaggagccagtctctgcacccaaa
caatccggctccttcaaatacctacaaggcatattggaggcagaggatggaggtgtgtcc
cctactgacatgtctggagtgagaggccttaggtccccggaccgatccccagtccctaaa
ctgggcagccccacccccggccacatgggccccatgcccggcctacagaaactcccccag
tgcacgcgctgtggcaacggcatagtgggaaccatcgtgaaggccagagacaaactgtac
cacacagagtgcttcatgtgtgatgactgcggcatgaacctcaagcagaggggctacttc
ttcatcgaggagaacttgtactgtgagacccacgccatggcccgcgtacagcctcctgag
ggatatgacgtggtcgccgtctaccccaactccaaggttgaactggtctga
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