Oncorhynchus kisutch (coho salmon): 109892966
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Entry
109892966 CDS
T09179
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04080
Neuroactive ligand-receptor interaction
oki04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109892966
04082 Neuroactive ligand signaling
109892966
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109892966
Ion channels [BR:
oki04040
]
Ligand-gated channels
GABA-A
109892966
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
109892966
NCBI-ProteinID:
XP_020341483
Ensembl:
ENSOKIG00005049293
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All DBs
Position
LG6:52411930..52444071
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AA seq
451 aa
AA seq
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MAFVFTFFFLSCVSNVWGNNPKSTEIDGNIYLDNITRILDRLLDGYDNRLRPGFGGPVTE
VKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEILRLNNLMVSKIWTPDTF
FRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLMNFPMDGHACPLKFGSY
AYPMSEIVYTWKKGPLFSVEVPEESSSLLQYDLIGQTVSSERLKSNTGEYVIMTVHFHLQ
RKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKV
SYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKVAAIKAAQEAAEAGRSDGE
SSSDASSMLKKRMNSTTHFERPAEVFPNPPVNAQAFLQQGSAVPSNNLLTGTSIIDKYSR
ILFPLSFGAFNLVYWIVYLTKDTMEMTRDSV
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgttttcactttctttttcctgtcctgtgtgagcaatgtttggggaaataat
ccgaaatcgaccgagattgatgggaatatctatctggataacattacgcgtatattggat
agattactagatggatatgacaacagactgcgacctggatttggaggtccagttaccgag
gtcaaaacagacatctttgtaaccagctttggtccagtgtcagatgttgagatggagtac
accatggacgtatttttccgtcaaacgtggattgacgagaggttgaaattcgagggcccc
atcgagattctgcggctcaacaacctcatggtcagcaagatctggacgccagacacattc
ttccggaatggcaagaggtccatctctcacaacatgaccactcccaacaagctgttccgc
atcatgcagaacggaactatcctctacaccatgagattgactataaatgcggagtgtccc
atgcgactgatgaacttccccatggacggccatgcctgtcctctcaagtttggtagttat
gcctaccccatgagtgaaattgtgtacacatggaaaaaaggaccactgttctctgtggaa
gtaccagaggagtcctccagcttgctacagtacgatctaataggacagacagtgtccagt
gagaggttaaaatccaacacaggtgaatatgtaatcatgactgttcacttccaccttcaa
aggaagatgggcttcttcttgattcagacatacattccctgtatcatgacggtgatcctg
gctcaggtctctttttggatcaataaggaatctgttcctgctcgaactgtatttggcatt
accactgtgctaaccatgaccacactcagcatcagcgcccgccactctctgcccaaagtt
tcctacgccacagccatggactggtttattgccgtatgtttcgccttcgttttctcagcc
ctcatcgagtttgcagcagtcaactacttctccacgctgcaggccaaccgggagctccgc
aaggtggccgccatcaaggcagcccaggaggctgcagaggccgggaggagtgacggggag
tcctcttcggacgccagcagtatgctgaagaagaggatgaactctacgactcactttgag
aggccagcggaggtgttccctaaccctccagtgaatgcccaggccttcctccagcaaggc
tcagccgtgccgtccaacaacttactgacaggcaccagcatcatagacaagtactcacgc
atcctcttccctctgtcgttcggggccttcaacctagtctactggatcgtctatcttacc
aaggacaccatggagatgacaagagacagcgtgtga
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