Oncorhynchus kisutch (coho salmon): 109892985 Help Entry 109892985         CDS       T09179                                  Symbol rad50 Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism oki  Oncorhynchus kisutch (coho salmon) Pathway oki03440   Homologous recombination oki03450   Non-homologous end-joining oki04218   Cellular senescence Brite KEGG Orthology (KO) [BR:oki00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     109892985 (rad50)    03450 Non-homologous end-joining     109892985 (rad50)  09140 Cellular Processes   09143 Cell growth and death    04218 Cellular senescence     109892985 (rad50)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:oki03032]     109892985 (rad50)    03400 DNA repair and recombination proteins [BR:oki03400]     109892985 (rad50) DNA replication proteins [BR:oki03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     109892985 (rad50) DNA repair and recombination proteins [BR:oki03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      109892985 (rad50)     BRCA1-C complex      109892985 (rad50)    NHEJ (non-homologous end-joining)     MRX complex      109892985 (rad50) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_23 Rad50_zn_hook SMC_N AAA_21 SbcC_Walker_B ABC_tran AAA_29 AAA_22 AAA_13 Motif Other DBs NCBI-GeneID:  109892985 NCBI-ProteinID:  XP_020341523 Ensembl:  ENSOKIG00005050222 LinkDB All DBs Position LG6:complement(54039448..54088323) Genome browser AA seq 1313 aa AA seqDB search MSRIEKMSILGVRSFGVEDKDKQVISFFNPLTVLVGPNGAGKTTIIECLKYVTAGEFPPG SKGNTFVHDPKDAHETDVRAQIRLQFTDLNGEKVAVQRSMQATQKGKKTEFRSLEGVITR IKHGEKVSLSSKCAELDREMISALGVSKAVLDHVIFCHQEESNWPLGEGKPLKNKFDAIF SATRYIKVLETLRQLMLKQSNEVRECQVELKFLKLNKEKALEIRELLASKETQLASSKDA VQKIEGQIEPLENRLVDIDENLGKVMKLDNDIKALDSRKKQMEEDNQELEEKMEQVFQGS DEQLQEMYQNHQRTVKEKEKRFTECQREMERAVRECQRLNRLQSDLLVEQGRLQLEADRH AQNMKARDSQVRALAAYLEMEGYDRSPFNDRQLQSFNRQVKERLDQETEAANQVMRDIQE KEAMKQQSIDEIRDKKTGLERTMELKKDLQVKKQQELRNVKSDLQRLEGSSSRLQELETE LTKAERELESAVQSSNVDGLKAEVLELQKDKAELDRTQRRLDREMETLNTHTTTRTQMDM LKKDKTDKEDQVRKIKSRHSEDLVSLLGHFPKKRELEDWIHAKSKEINSTREKLAKLNKE LASGEQNKSHITAEIRRKEQQLASYEEKMFNVCGSQDFQQDLGKLQDDLEKTSKQRAMLA GATAVYTQFISQLTEEGEPCCPVCQRIFPSEAELQDVINDMQSKLRLVPDKLKNTEQDLK RKERRKDDMMALKPVRQSIAELQEKELPELRNRLQNVNRDIERLKGDVEEQETLLSTLMS EEDTAKACLQDISLMDRYQLDLKDVERKIAQQAAKLQGVDLSRTIQQVNQEKQETQHRLD TTSSKMELKRKLIQDQQEQIQSLKSSMNETRAEKLQISSNMQKQQQLEEQCVEYTTEIQA LHREIKEAKEQVSPLATTLEKLQQERLDLMERRKQRQEEGQEKINSIKDKVKSMAAFERE ITGYTEEGKDDYKEQKEGELRETNTQVHEAEKQREKINKDSGNIRQDIDTQKVQERWLQD NLTLRKRIEELKDVTKKREAVAKDMGNMQVLQLRNERRESEQRVDDLKKNRSVALGRQKG FEEEIIRFRKELREDQYGKADERFRDRMIVMRTTELANKDLDIYYKALDQTIMKFHSMKM EEINKIIRDLWRSTYRGQDIEYVEIRSDVDENSSGAGVKRRTYNYRVVMVKGDTALDMRG RCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQ RNFQLLIITHDEDFVELLGRSNYVEHFYRIRKNMDQCSEITKCSVSSLTSYLH NT seq 3942 nt NT seq  +upstreamnt  +downstreamnt atgtccagaattgagaagatgagcatcctcggtgtgaggagctttggagtggaagacaaa gacaaacaagtcatatcattctttaatcccttgactgtgttagtgggacccaatggtgct ggtaaaacgactatcattgagtgtctgaagtatgtaacagctggtgaatttcccccagga agcaaagggaatacatttgttcatgatccaaaggatgctcatgagactgacgtgcgagct cagatccgactgcagttcaccgatctaaatggagagaaggtggcagttcaaaggtccatg caggcaacacagaagggcaagaagactgagttcagaagtctggagggggtcatcaccagg atcaagcatggagagaaggtgagcctgagctccaaatgtgcagagctggacagagagatg atctcagccctgggtgtgtctaaagctgtcctcgaccatgtcatcttttgtcaccaagag gagtccaactggcccctgggagaagggaagcccctcaagaacaaatttgatgctatcttc tcagccacaaggtacatcaaggtgctggagacgctgaggcagctgatgctcaagcagtct aacgaggtgagagagtgccaggtggagctgaagttcctgaagctgaacaaggagaaagcc ctcgagatcagggagctgcttgccagcaaggagacccagctggcctcctccaaagatgcc gtacagaagatagagggccagatcgaacccctggagaaccgactggttgacattgatgag aatctgggaaaagtgatgaaactcgacaacgacatcaaggctttagacagcaggaagaag cagatggaggaagacaaccaggaactggaggagaaaatggagcaggtgttccagggctca gatgagcagctgcaggagatgtaccaaaatcaccagaggacagtgaaggagaaggagaag aggtttacagagtgccagagggagatggaacgagccgtgagagagtgccagagactcaac cgcctccagtccgaccttctagtagaacaaggtcgtctccagctggaggctgatcgccat gcccagaacatgaaggctcgtgactcccaggtgagagccctggcagcctatctggagatg gagggctacgaccggtcccctttcaatgacagacagctgcagagcttcaaccgccaggtc aaagaaagactcgaccaggagactgaggccgccaaccaggtcatgagggatatacaagag aaggaggccatgaagcagcagagcatcgatgagataagagacaaaaagactggtctggag aggaccatggagctgaagaaagacctgcaggttaagaagcagcaggaactgaggaacgtc aagtctgacctacagagactggagggctcctcctcccggctgcaggaactggagacagag ctcaccaaagcggagcgtgagctggagagcgcggtgcagagctccaatgtggatgggctg aaggccgaggtgctggagctccagaaggacaaagctgagctggaccgcacacagcgtcgg ctggaccgtgaaatggagacccttaacacacacaccaccacacgcacacagatggacatg ctcaagaaggataagacagataaagaagatcaggtgaggaagatcaagtcaaggcacagt gaggatctggtgtccctgctgggtcacttccctaagaagagggagctggaggactggatc cacgccaagtccaaagagatcaactccaccagggagaaactagccaagctcaataaggag ctggcgtcgggggagcagaataagagccacatcacagcagagatcaggaggaaggagcag cagctggccagctatgaggagaagatgttcaacgtgtgtggcagtcaggacttccagcag gacctgggcaagctgcaggacgacctggagaagacctccaagcagagagccatgctggcg ggagccacagccgtgtacactcagttcatcagtcagctgacagaggagggcgagccctgt tgccccgtgtgccagcgcatcttcccctcggaggctgagctccaggacgtcatcaacgac atgcagtccaagctgcgcctggtccctgacaagctgaagaacaccgagcaggacctgaag aggaaggagaggaggaaggacgacatgatggctctcaaacctgtcaggcagtctattgct gagctgcaggagaaggagcttcctgagctgaggaaccggctgcagaacgtgaaccgggac attgagaggctgaagggggatgtggaggagcaggagaccctgctgtccactctgatgtca gaggaggacacagccaaggcctgcctgcaggacatctccctcatggacagataccagctg gacctgaaggatgtggagaggaagatagcccagcaagctgccaagctgcagggagtggac ctgagccgcaccattcagcaggtcaaccaggagaaacaggagacccagcatcgcctggac acaacatccagcaagatggagctgaagcgtaaactcatccaggaccagcaggagcagatc cagagcctgaagagcagcatgaacgagacccgggcggagaagctgcagatctccagtaac atgcagaagcagcagcagctggaggagcagtgtgtggagtacaccactgagattcaggct ctgcacagagagatcaaggaagctaaggagcaggtgtcccctctggccaccaccctggag aagctgcagcaggagaggctggatttgatggagcgcaggaagcagaggcaggaggaggga caagagaagataaatagcatcaaagacaaagttaaaagcatggccgcctttgaaagagag attaccggatacacagaagagggcaaggatgattacaaagagcaaaaagagggggagctc cgagagaccaacactcaggtccatgaggcagagaagcaacgggagaagattaacaaagac agtggaaacatcaggcaagacatagacactcagaaggtccaagagcgttggctgcaggac aacctgacgttgaggaagcgcatcgaggagctgaaggacgtgaccaagaaacgagaggct gtggcgaaggatatggggaacatgcaggtcctgcaactacgcaacgagcgcagggagtct gagcagcgcgtggacgacctgaagaagaaccgcagcgtagcattgggccgacagaagggc tttgaggaggagatcatccgcttccgcaaggagctccgcgaggaccagtacggcaaggct gacgaacgctttcgggacaggatgatcgtcatgaggaccacagagctggccaacaaggac ctggacatctactacaaggccctggaccaaaccataatgaagtttcacagtatgaagatg gaggagatcaacaaaatcatccgggacctctggcgcagcacataccgaggacaagacatc gagtatgtggagatccgctctgatgtggatgagaattcttctggggcgggagtgaagagg aggacctataactaccgtgtggtgatggtgaagggagacacggcgctggacatgaggggt cgctgcagtgccggccagaaggtcctggcctccctcatcatccgtctggctctggctgag accttctgtctgaactgtggcatcctggccctggacgagcccacaaccaacctagacagg gagaacatcgagtccctcgcacacgcccttgtggaaatcatcaagagccgctcacgccag cgcaacttccagctgctcatcatcacccatgacgaggactttgtggagctcctggggcgc tccaactacgtggaacacttctaccgtatcaggaagaacatggaccagtgctctgagatc accaagtgcagtgtctcctccctcacctcctacctgcactga

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