Oncorhynchus kisutch (coho salmon): 109893033
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Entry
109893033 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109893033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109893033
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109893033
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109893033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8_fungal
PA
Motif
Other DBs
NCBI-GeneID:
109893033
NCBI-ProteinID:
XP_020341616
Ensembl:
ENSOKIG00005009430
LinkDB
All DBs
Position
LG6:57884429..58049716
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AA seq
864 aa
AA seq
DB search
MTVPQRRLAGLWPWLLIAALQVVFGQTGLELAAAVETERSAPRAVIKVTLLRHEPTGKPI
TLEGLFVGGSAGYAEGKLMQSHPLSLCNTSEDERQESDFISIVKLESPERKVPQCLPLLK
KARLALERGAQAVIFDVTDDKDAALELHESDSLPLPVVLVKAKDAEELMGLVNKNEEARV
RIDIKKEDPKWPHYDVGILLTIVLAILAIVLIFAFRYRCKSNRTWDSVHQQTMRAISRLE
TRMYSSQGCGGSQRHRGGWGSNSSSNSSPVCAICLEEFLDGQDLRIISCAHEFHKECVDP
WLLQHRTCPLCMHNIMGTELSRQPQRSRLQQTPEHSQGFLHPHPYPHAFPQHPIPFSMRP
HYPRGPSGPYPSLSHYSSSPPLDPQTLRFLPSWPLGSGCGYIHPTEGPGRPHKAGSSCRT
AGHPLGSHYGPRSHRSCHAYRSGCPAQRSNSSSRLHHTPSFAPRTSEGGAHSRGAEGGSC
SGGSYRTERSGYLADGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDY
DPFVYYGPGLGRTGRRDSMEAGAQRPRSLDSVMNRDRGRGSPEEQPQAVFSHVHYHRHRH
HHYGEDGEREREHAQGQGPGRGSDEEQGAAVAIGSDTGSPPALDKDFPVCPLKHSPCQCP
KAEHTDSTEVHGHGIEGQDHELSLSPPSGPPPALVAPAPLAAPAPCCHQDHGRGGHPHRR
ADRLGGCVLDGPSVLFHQSLELQDDCSIHIHYGQGPSYCCPPPDLPMPVPFILDSGGMGA
LGGLEDWSCCGGPHHVVWQKRVQQAHSEPQLLGPGLGGPMDRPPPPCSRRHHGHHSPAHD
RNTDFCLYCQTLHNNQGSEEESGV
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttccccagcggcgattggccgggctctggccgtggctgctcatagcggccctg
caggtggtgttcggccagacgggcctggagctggcggcggccgtagaaacggagcgctcg
gcccccagggctgtcatcaaggtgacactgctaagacacgagcccacggggaagcccatc
actctggaagggctgttcgtcggagggagcgccggctatgcagaggggaagctcatgcag
tctcaccctctgtccctgtgcaacaccagtgaagatgagcgccaggagtctgacttcatc
agcatcgtcaagctggagagcccggagcgcaaggtgcctcagtgtctgcccctgctcaag
aaggctcgcctggcactggagagaggtgctcaggctgtcatcttcgatgtcaccgacgac
aaagacgctgctctcgagctgcatgagtctgactccctgccgcttccggtggtgctggtg
aaggctaaggatgctgaggagctgatgggactggttaacaagaacgaggaggctagagtc
cgcatcgacatcaaaaaagaggacccaaaatggccccactatgatgttggtatcttgctc
actatagtcctggctattctggccatcgttctgatctttgccttccggtaccgatgcaag
tccaacagaacctgggactcagtccatcagcagaccatgcgagccatcagtcgtctggag
acgcgaatgtacagctctcagggctgcgggggctcacagcgccaccgtgggggctggggg
tctaatagcagttccaactccagccccgtctgtgccatctgtctggaggagttcctggat
ggacaggacctgaggatcatctcgtgtgctcatgagttccataaggagtgtgtggacccc
tggttgctgcagcaccgcacctgtcctctctgcatgcacaacatcatgggtacagagctg
tcacgtcagccccagaggagcagactgcagcagacccccgagcacagccagggtttcctg
cacccccacccctacccacacgccttcccccagcatcccatccccttctccatgaggcct
cactacccccgtggcccctccggcccctacccctccctgagccactacagcagctcccca
cccctggacccccagacgctccgcttcctccctagctggcctcttggctccggctgtgga
tacatccaccctacagagggccccgggaggcctcacaaggccgggagcagctgcaggaca
gcaggtcaccctctggggtcccactacggccccaggtcccaccgctcctgccacgcctac
cgctccggctgccctgcccagcgcagcaactccagttccaggctccaccacaccccctcc
tttgctccccgcacctccgaagggggagcccatagccggggggccgagggaggcagctgc
tctggggggagctaccggacggagcgcagtggctacctggcagacgggccggccagtgac
tccagctctggcccctgtcacggttcatccagtgactcggtgctcaactgtaccgacgtg
tccctgcagggtgtgtatggtagctggtccacgttccgcagctccctgagcagtgactat
gatccgtttgtgtactacgggccgggtttgggacggacaggccgcagggacagcatggag
gcaggggcccagagaccaaggtccctggactcagtgatgaacagagacagaggacgaggg
agccctgaggagcagccgcaggctgtgtttagccacgtccactaccaccgccacagacac
caccactacggagaggacggggagcgggagcgggagcacgcccagggacaggggccaggc
agggggtcagacgaggagcagggggctgctgttgctattggctctgatactggttctccc
ccggctctggacaaggacttcccagtgtgccctctgaagcacagcccctgtcagtgccct
aaggcagaacacacagacagtacagaggtccacggccacggaatagagggtcaggaccat
gagcttagcctcagccccccgtcaggcccccctcctgccctggtagcaccagcaccctta
gcagccccagccccctgctgccaccaggaccacggccgtggaggccacccccaccggagg
gcagaccggctcggcggctgcgtcctcgacggcccctcggtgctcttccaccagagcctg
gaactgcaggatgactgtagcatccacattcactacggccagggccccagctactgctgc
cccccgcctgacctgcccatgcctgtgcctttcattctggactctgggggtatgggggcc
ctagggggcctagaggactggtcctgctgtggagggccccaccatgtagtgtggcagaag
cgggtgcagcaggcccactctgagccccagttgctggggccaggactggggggccctatg
gacagacccccgcccccatgcagcaggcgtcaccacggtcaccacagcccagcgcacgac
cgcaacacagacttttgtttatactgccaaacattacacaacaatcagggatcagaggag
gagtccggtgtgtga
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