KEGG   Oncorhynchus kisutch (coho salmon): 109893088
Entry
109893088         CDS       T09179                                 
Symbol
atxn2l
Name
(RefSeq) ataxin-2-like protein isoform X1
  KO
K23625  ataxin 2/2L
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oki03019]
    109893088 (atxn2l)
Messenger RNA biogenesis [BR:oki03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109893088 (atxn2l)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 109893088
NCBI-ProteinID: XP_020341714
Ensembl: ENSOKIG00005033790
LinkDB
Position
LG6:61909931..61931098
AA seq 993 aa
MSFRRQNQQPGSCGRKTSNGTAGPAGLPPHISGSNTNRAVPGRTRNTMKPPSQSSPVFEG
VYNNTRMLHYLTAVVGSTCDVRVKSGNVYEGIFKTLSSRCELVVDAVHKRSEGGEADGDG
GGGLPPSLPRIEEITDTMIFSPGDLVTMTCRDVDLNYAIRDAFTDTAISSSRVNGEHREK
VLQRWDGGDSNGEGFDLETDTSNGWDASEMFKFNEETYGVTSTYDSSLSMYTVPLERGSS
DGFRQREARAARLANEIEGSPQYRHRTNLENDDKSEEDKYSAVVRERDEGRERGSPGFQS
SAGSREGKYIPLPQRAREMGVSPSSLRGGASGPIPSRTGVPGSSRPSQGSDRSSPLSVRS
AYSPHQSQASPPAQPSSPTPSSSSHPIPHSISHPQALADASRSSVNGVSSRTSPKAQRSV
QTNRTLRNPSSQSSPAVSRSPKLDDPVLAGPAYLDTSSSSIASATPKSSGPTPLFTVDVN
EILSSAAKERTEGPASPQDGKSGKVPSVLQRTQLEELRKFGKEFRLQPSSSPSAGPTSSE
PAQPSPSDSATTAESIPAPGHTPSQDPQTGEGSSFTPNPTTPTPSPAPNTTSQSSGPDRQ
AAGTPQPARTPGSEEGGERVEGVADQVKKSTLNPNAKEFVFKAPMTLVKPSPAPTPPRPT
PLSPSVVLQPPPGQQAIYSTPYLSYLSPVQIQGHSVQPPQMYQYTMSTVQQGKYPRAKGQ
VVGPRPDHHGSSQPQMLQAAASAAGPPLVASPYPQAYLQYSQVIQGMPHYPGQPVYSMLQ
GGARMLTQAGHPQALGPPGPQYPGQTEGPPGPQQTMYAPQQFSHHSSSMHPPQPSSTPTG
SQPPPQHTAPSPGHGQSGQGGPQPQSMYHSGPLPAPTPPNMPPGHSSPQASYPMQGYSLP
THQPMAQHYPGLGQLTQAHVAQGMSGPHHQGGHGPPQMMLHYAPPPQQGPGSAQQHGPPP
QQGAHQHYYIQHPQAVQVQAHPTQQLSFHPPGN
NT seq 2982 nt   +upstreamnt  +downstreamnt
atgtcttttcgtcgacagaaccaacaacccggttcatgcggacgaaaaacctccaatgga
acggcagggccagccggtttaccccctcatatcagcgggagtaataccaacagagctgtg
cctggaaggacaagaaatacaatgaagccgccatctcagtcctctcccgtatttgaaggt
gtctacaacaacaccaggatgcttcactatctcacagctgtagtgggctccacctgtgac
gtccgagtgaagagtggaaatgtgtatgaaggcatcttcaagaccctcagctcaaggtgt
gagctggtggtcgacgcggtccacaagaggagtgagggaggagaggcggatggagacgga
gggggaggcttgccaccctctctgcccaggatcgaggagatcacagacaccatgatcttc
agccccggcgacctggtcacaatgacttgccgagatgtggacctcaactacgccatcaga
gatgctttcacagatacagcaatcagctcatcgcgggtgaacggagaacaccgggagaag
gtgctgcagcggtgggacggaggcgacagcaatggagaaggcttcgacctggagactgac
acgtctaatggctgggatgccagcgaaatgttcaagtttaacgaggagacatatggtgtc
acgtccacctacgattccagcctctccatgtacactgttcccctggaaaggggcagctca
gatggcttccggcagcgggaggcacgtgcggcccgcctagcgaatgagatcgagggaagc
ccccagtaccgtcaccgcaccaacctggagaacgacgataagagcgaggaggacaagtac
agcgccgtggtccgagagagggatgaggggagggagaggggcagccctggattccagagt
agtgccgggagcagggagggtaaatacattcctcttccccagagggccagggagatgggt
gtgtcccccagcagcctgaggggcggagcctctggtccaatacccagtcgaacaggagtc
cccggctcttctaggccctcccagggttctgataggagcagcccgctgtccgtcaggagc
gcctactctccccaccagtcccaagccagccccccggcccagcccagtagccctaccccc
tcttcctcctctcacccgatccctcactccatctctcacccacaagctctagccgatgcc
tcacgctcttctgtcaacggagtgtcatccagaacttctcccaaagcccagagatccgta
cagaccaatagaactctgcgcaacccaagttcccagtcctcacctgcagtctctcgctct
ccaaaactagacgaccccgttctggctggccctgcctacctggacacttcctcctcctcg
atcgcctcggcaacacccaagtcctctgggcccacccctctgttcactgtggatgtgaat
gagatcctgagctcagcggctaaggagaggacagaaggcccagccagccctcaggacggc
aagagcggcaaagttccctcagtcctgcagagaacacagctggaggagctccggaaattt
ggcaaagagttcaggctccagcccagctcctccccttctgctggccccacttcctcagag
cccgcccagccctccccatcagactccgccaccacagccgagtctatacccgcccctggc
cacaccccctcccaggacccccagactggagaggggtcctccttcaccccgaatcctacc
acccctaccccctctccagcccccaacaccacctctcagtcatcaggtccagacagacag
gctgcagggacaccccagccagccaggacccctggcagcgaggagggcggcgagcgagtg
gagggcgtggctgaccaggtgaagaagtctacgctgaaccccaacgccaaagagttcgtc
ttcaaggcacccatgaccctggtgaagccgtccccagcccccacccccccgcggcccact
cctctcagcccctccgtggtgctccagccccccccaggacaacaggccatctacagcacc
ccctacctgtcctacctctcccccgtacagatacagggacactctgtacagcctccccag
atgtatcagtacaccatgtccacagtccagcaggggaagtatcccagagctaaaggccag
gtggtaggccctcgtccggaccaccacggctcttctcagccccagatgctccaggctgca
gcgtctgcagcaggccctcccctggtggcctccccctacccccaggcctacctgcagtac
agtcaggtcatccagggcatgccccactaccccggacagccggtgtactccatgctgcag
ggtggggccaggatgttgactcaggcaggccacccccaggctctgggccccccaggccct
cagtaccccggacagacagaggggcccccgggaccacaacagaccatgtatgctccccag
cagttctcccaccattctagctccatgcaccctccgcagccctccagcacacctactggg
agccagccccctccccagcacactgcccccagccctgggcacggacagtcgggccaggga
ggcccccagccccagtccatgtaccactctgggcccctgccagcacccacaccccctaac
atgccccctggccacagctctccccaggcctcttaccccatgcagggctacagcctgccc
acccaccagcccatggcccaacactaccccggcctgggacagctcacacaggcccatgtt
gcccaaggtatgtctggcccccaccaccaaggaggccacggcccgccccagatgatgctg
cactacgccccgcccccacagcaaggcccaggctccgcccagcagcacggccctcccccc
caacagggggcgcaccaacactactacatccaacacccacaggctgtacaggtgcaggct
caccccacccagcagctctccttccatccccctggaaactga

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