Oncorhynchus kisutch (coho salmon): 109893161 Help Entry 109893161         CDS       T09179                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism oki  Oncorhynchus kisutch (coho salmon) Pathway oki03040   Spliceosome Brite KEGG Orthology (KO) [BR:oki00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     109893161  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:oki03019]     109893161    03041 Spliceosome [BR:oki03041]     109893161 Messenger RNA biogenesis [BR:oki03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      109893161 Spliceosome [BR:oki03041]  Complex B   Other components    Prp19-related factors     109893161  Complex C     109893161 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_PRP39_N TPR_14 TPR_2 TPR_12 Suf TPR_8 TPR_15 TPR_16 ARM_TT21 ARM_TT21_C NRDE-2 SNAP LTN1_E3_ligase_6th TPR_1 Motif Other DBs NCBI-GeneID:  109893161 NCBI-ProteinID:  XP_031683009 Ensembl:  ENSOKIG00005002776 UniProt:  A0A8C7D0V1 LinkDB All DBs Position LG6:complement(63431093..63446909) Genome browser AA seq 851 aa AA seqDB search MPSLNGKPDVMFEEDDLPYEEEIIRNPYSVKCWMRYIEFKQNGVKSVLNMIYERALKELP GSYKLWYNYLRERRKQVKGKCITEPAYEEINNCHERALVFMHKMPRIWLDYCQFLVAQCK ITRSRRTFDRALRALPVTQHPRIWPLYLRFARNLPLPETAIRVYRRYLKLSPENAEEYID YLRSCSKLDEAAVRLAAVVNDESFVSKEGKSNYQLWHELCDLISQNPDKVNSLNVGAIIR GGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSYAQFEES MIAAKMETTSEMGKDEEEDIDLELRLARFEQLIARRPLLLNSVLLRQNPHNVHEWHKRVK LYEGKPRQIINTYTEAVQTVDPMKATGKPSSLWVSFAKFYEENEQLDDARTIFEKATKVN YKQVDDLAGVWCEYGEMELRHENYEQALRILRKATAIPSKKAEYFDVSEPVQNRVYKSLK VWSMLADLEESMGTFQSTKAVYDRIIDLRIATPQIIINYAMFLEEHNYFEESFKAYERGI ALFRWPNVYDIWNTYLTKFIDRYGGKKLERARDLFEQALDGCPAKFAKTIYLLYAKLEEE FGLARHAMAVYERATQAVDNTERHHMFNIYIKRAAEIYGVTYTRAIYQKAIEVLPDEHSR DMCLRFADMESKLGEIDRGRAIYSYCSQICDPRMTATFWQTWKEFEIRHGNEDTIREMLR IKRSVQATYNTQVNFMSSQMMKATTNATGTISDLAPGQMGLDDMKLLEQQAQLLAAEAEQ DKPKLKEKILFVRSDTSRSELAELAKQANPDEIDIDDEDEDGDEDQGPEEVQLEQKSVPT AVFGGLKEGED NT seq 2556 nt NT seq  +upstreamnt  +downstreamnt atgccctctctaaatgggaaaccagacgtcatgtttgaggaagatgacctgccttatgag gaggagatcatcaggaatccgtactcggtcaagtgctggatgcgctacatcgagttcaaa cagaatggcgtcaagtccgtcctcaacatgatctatgaacgagctctaaaagagctacct ggcagttacaagttatggtacaactacctgagagagagacggaaacaggtcaaagggaag tgcatcacggagccagcctacgaggagatcaacaactgccatgaaagagcactggttttc atgcacaagatgccgaggatctggctggactactgccagttcctggtggctcagtgtaag atcaccaggagcagacgcacgtttgaccgagcactccgagccctgcccgtcactcagcac cctcgcatctggcccctgtacctccgctttgcccggaacctacccctgcctgagaccgcc atccgtgtctatcgcaggtacctcaagctgtccccagagaatgcagaggagtacatagat tacctgcgttcctgcagcaagctggatgaagcagcagtgcgactggcagccgttgtcaac gatgagagctttgtgtccaaggagggcaagtctaactaccagctatggcacgagctgtgt gacctgatctctcagaacccagacaaggtgaactctctgaatgttggggccatcatccgt ggaggcctcactcgtttcacagaccagctgggcaaactctggtgctctctggctgactac tacatccgcagtggacattttgaaaaggctcgtgatgtgtatgaggaggccattttgact gtggtgactgtgagagatttcacccaggtgttcgacagctacgcccagtttgaggagagc atgatcgctgccaagatggagactacctccgagatggggaaagatgaagaagaggacata gacctggagctgcgtctggcccgctttgagcagctgatcgcccgcaggcccctcctgctg aacagtgtgctgctcagacagaacccccacaatgtccacgagtggcataagagggtcaaa ctgtacgaggggaaaccacgacagatcatcaacacctacacagaggcagttcagactgtg gaccctatgaaggctacagggaaacccagctctctctgggtctccttcgccaagttctac gaggagaacgagcagctggacgacgcgcggaccatctttgagaaagccaccaaggtgaac tacaagcaggttgatgacctggctggcgtgtggtgtgaatacggggagatggagctacgc catgagaactacgaacaggcgctacgtatactgaggaaagcaactgccatcccgtccaag aaggcggagtactttgacgtgtcagagccggtgcagaacagagtgtacaagtctctgaag gtctggtccatgctggctgacctggaggagagtatgggaaccttccagtccaccaaggca gtgtacgaccgcatcattgacctacgcatagccacgccccagataatcatcaactacgcc atgttcctggaggagcacaactactttgaggagagcttcaaggcgtacgagcgcggcatc gccctcttcaggtggcccaacgtctatgacatctggaacacctacctcaccaagttcatc gaccgctacgggggcaagaagctggagagggcccgggacctgtttgagcaagcgctggat ggctgtccagccaagttcgccaagaccatctacctgctgtacgccaaactggaggaggag tttgggttggcgcgtcatgccatggcggtgtacgaaagagccacgcaggcggtggacaac acggagaggcatcacatgttcaacatctacatcaagagggctgcagagatctacggcgtc acctacaccagagctatataccagaaagccatcgaggtgcttccagacgaacactccagg gacatgtgtctgcgcttcgctgacatggagagcaaactgggcgagatcgaccggggacga gccatatactcctactgctctcagatctgtgacccaaggatgacggccacgttctggcag acatggaaggagtttgagatccgccatgggaacgaagacactatccgggaaatgctgagg atcaagcgtagcgtccaggccacgtataacacacaggtcaacttcatgtcctcacagatg atgaaggccaccaccaacgccaccggcaccatctcagatcttgccccgggccagatgggg ctggatgatatgaagctgttggagcagcaggcccaactgctggctgccgaggctgaacag gacaaacccaaactcaaagagaagatcctcttcgtcaggagtgacacgtcacgcagcgag ctggctgaactggccaaacaagccaaccctgatgagattgatattgatgatgaggatgag gatggtgatgaagaccagggccctgaggaggtgcagctggaacagaagagcgtccccact gctgtctttggagggctgaaagaaggagaagattga

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