Oncorhynchus kisutch (coho salmon): 109893165
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Entry
109893165 CDS
T09179
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00310
Lysine degradation
oki00514
Other types of O-glycan biosynthesis
oki01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
109893165
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
109893165
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oki01003
]
109893165
Enzymes [BR:
oki01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
109893165
Glycosyltransferases [BR:
oki01003
]
O-Glycan biosynthesis
O-linked Gal type
109893165
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_tranf_2_4
Glyco_transf_25
Anp1
CAP59_mtransfer
Motif
Other DBs
NCBI-GeneID:
109893165
NCBI-ProteinID:
XP_020341833
Ensembl:
ENSOKIG00005009217
LinkDB
All DBs
Position
LG6:complement(63760064..63783387)
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AA seq
609 aa
AA seq
DB search
MHGYNFLLSTALTILFSGPAQGYFPEERWSPESPLLAPRVLIALVCRNSEHSLPYFLGNI
ERLNFPKDRVAIWVATDHNVDNTTAILRDWLVKVQKLYHYVEWRPQEEPTEYQDADSPKQ
WTNLRYAHVMKLRQAALDSARDMWADYFMVADCDNLLTNPNVLWKLIKEKKTIVAPMLES
RAAYSNFWCGMTSQGYYKRTPAYIPMRKQVRKGCFAVPMVHSTFLIDLRKEASRQLAFHP
PHPDYSWAFDDIIVFAFSARMADVQMFLCNRETYGYFPVPLRAHNSLTDEADSFLHSLLE
VNVRNPHVLPSEYIPAPIKIQDKLGFDEVFMINLKKRTDRRDRMLRTLYEQEIACKVIQA
VDGKAMNISEINALGIHMLPGYSDPYHGRPLTKGELGCFLSHYNIWKEIAERGLKSSLVI
EDDLRFEVFFKRRLMNLMSEVESQGLDWDLIYIGRKRMQVDHPEKSVPNIHNLVEADYSY
WTLGYMMSLQGAQKLLRAEPLKRILPVDEFLPVMFNKHPVSDYMEQFEVRDLKAFSAEPL
LVFPTHYTGDAGYISDTETSVVWDNEKVRTDWDRARSGKTQEQAEISSEAQNSDVLQSPL
DSTATRDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggtacaacttccttctgtccaccgccctgacgatactgttctccggaccagct
caaggatacttccccgaagagcgctggagccccgaatctccacttcttgccccgcgggtc
ctcattgccctcgtctgccgcaactctgaacattctctgccttatttccttggaaatatc
gaacgtctgaattttcccaaggaccgcgtggcaatttgggttgcgacggatcacaatgtg
gacaacactacagccatcctgcgtgactggctcgtcaaggtccaaaaactgtaccactat
gtggagtggaggccgcaggaggagcccacagagtaccaggatgcagacagcccgaagcag
tggaccaacctccgctatgcacacgtgatgaagctacggcaggcagcactggattccgca
agagacatgtgggcagactacttcatggtagcggactgtgataacctattgaccaatcct
aatgtactgtggaagctcatcaaggagaagaagacgatcgtagctcccatgttagagtcc
cgtgcagcttactccaacttctggtgtggcatgacctcccagggttactataagcgcacc
ccggcatacatccctatgagaaagcaggtgcgtaaaggatgctttgcggttcccatggtg
cactccaccttcctgattgacttgaggaaggaggcgtcacgccagctggccttccacccc
cctcacccagactacagctgggccttcgatgacatcattgtcttcgccttctcggctcgc
atggcagatgtgcagatgttcctatgtaacagagagacttatgggtatttccccgtgcca
ctgcgagcccacaactccctgacagacgaagcagacagcttcctacattccttgttggag
gtcaatgtgcggaaccctcatgtgctgccctcggagtacatcccggcccccataaagata
caagataaactgggctttgatgaggtgttcatgatcaacctaaagaaacggaccgaccgg
cgggatcgcatgctgaggactctgtacgagcaagagattgcctgcaaggtcattcaagcg
gtagacggcaaagcgatgaacatcagtgagatcaatgccctggggatccacatgctacca
ggctacagtgatccgtatcacggcaggcccctcactaagggagagctgggctgcttcctc
tcacactacaacatctggaaagagatcgcagagcggggtctaaagagttccctggtgatc
gaggacgatctgcgtttcgaggtcttcttcaagcgacgcctgatgaacctgatgagtgaa
gtggagagccagggtctagactgggacctgatttatatcggcaggaagcggatgcaggtg
gaccaccctgagaagtctgtgcccaatatacacaacctggtggaggccgactactcctat
tggacgctgggctatatgatgtcattacaaggagcccagaagctgctgagggcagagccg
ttgaagaggatattacccgtagatgagttcctccctgtcatgttcaataagcaccctgtc
tcggactacatggagcagtttgaggtgcgagacctgaaggccttctcggccgagcctctg
ctagtattccccactcactacacaggagacgcaggctacatcagcgacacagagacctcc
gtggtgtgggacaacgagaaggtgcgtacggactgggaccgggcccgctcggggaagacc
caggagcaggcggagatcagcagcgaggcccagaactctgatgtactccagtcacctctg
gacagcacagccacacgggacgaactatga
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