Oncorhynchus kisutch (coho salmon): 109893208
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Entry
109893208 CDS
T09179
Name
(RefSeq) integrin alpha-IIb
KO
K06476
integrin alpha 2B
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04510
Focal adhesion
oki04512
ECM-receptor interaction
oki04810
Regulation of actin cytoskeleton
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109893208
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109893208
09142 Cell motility
04820 Cytoskeleton in muscle cells
109893208
04810 Regulation of actin cytoskeleton
109893208
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oki01009
]
109893208
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109893208
04515 Cell adhesion molecules [BR:
oki04515
]
109893208
04090 CD molecules [BR:
oki04090
]
109893208
Protein phosphatases and associated proteins [BR:
oki01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109893208
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109893208
Cell adhesion molecules [BR:
oki04515
]
Integrins
Integrin alpha subunits
109893208
CD molecules [BR:
oki04090
]
Proteins
109893208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
PH1_SSRP1-like
Motif
Other DBs
NCBI-GeneID:
109893208
NCBI-ProteinID:
XP_020341906
Ensembl:
ENSOKIG00005011009
LinkDB
All DBs
Position
LG6:complement(64757273..64772371)
Genome browser
AA seq
1056 aa
AA seq
DB search
MKKMEEHRIHRSIQMMGLLLFALPHYSDTLNLNLVNFTEFSGPEGSFFGFSADFYQFSNK
TISVVVGAPRANTSQPRVTEAGAVYLCPWAQTGGACTTMTFDTKGDEVYPHQNLVISSSK
SHQWFGATVRSSGNYIVACAPLFHWNVIDVGEREEAQNTPVGTCLVLNTLTGETVNFSPC
RDVMTEKNYKALKYTTDRRYCEVGFSSDITKEGRLLIGAPGGYYFQGQIISAGLPDIVDS
AKSQNAKPYVAGQTHSPETGGYDHYHGYSVATGEFTGDSIPDYVVGVPNDRNTAGSVKIY
NGNTPDFLGVKRTFFGSQVASYFGHSVAVTDINNDGIDDILIGAPLFMERVSGQQLQEVG
QVSVYLQRERSTFHSKPDQKLTGSQLYGRFGSTIAPLGDLDKDGFNDVAVGAPSSGVEGR
VFVYMGTSDGLSPQYTQVIESPFRSLGSPAQFGFTLRGATDIDSNGYPDLIVGAWGVNKI
AVYRAQAVVMAKTQLSLYPDFLNPDVKECQRPTTNEPVACFTVMMCISVSGHSIPEEIVL
DAELQLDKMKQTMARRTLFLQTNLPQEYFQLTIQRDVGVVCRNQTAYLRHESEFKDKLSP
IFISLNYSLSNSQEAMLHGQRAVVAQTRIILDCGEDNVCVPDLRLTAEAGTDRLLIGDDH
PALLVITAENRGEGAYETELEIRPPANTHYQSMVTDRKGFSKLICAQKKENQTVVMVCEL
GNPMKQGQKLLAGLFFSVGNLEEVENHVSFTLQIKSKNSQNPDSNVAHLRIDVSAEAALE
MRGGSSPPECVLPIAKWEQKEHPADLEEVGPLVEHVYELRNLGPSTVNARVQVEFPTHHH
GDVLLYVFANASEDFLTCHTDSPDIDPYQLVKTGNATVGKVYKVKQNEVAQQEPQRKETV
HVNCTSGDTCLRFVCEATGLERGWSAVVKVMSRLWVQTFLERPYENYVLHSTARFEVIDM
PSKIQPEELPSGQAETQTSVVWRAPDGEKEVPVWWIVVAVVSGLFLLALLALIFWKVGFF
NRNRPPCDDDDDAEHLAGAGQSEYAEMPTNTEDKQA
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatggaggaacaccggattcatagatcaatacaaatgatgggtctcctgcta
tttgctctcccacattactctgacaccttaaatctaaacctggttaacttcactgagttc
tctggccctgagggaagcttctttggcttctctgcagatttctatcagtttagcaacaaa
accatcagtgttgtggttggggcccctagagccaacaccagtcagccaagagtcactgag
gcgggggctgtgtatctctgtccctgggcacagacaggaggggcctgtactaccatgacc
tttgacacaaaaggtgatgaggtttatcctcaccagaacttagtgataagctcttcaaag
tcccaccagtggtttggtgctactgtgcgatcctccggaaactacattgtggcctgtgcc
cccctgttccactggaacgtaatagacgtgggggaacgtgaggaggcccagaacactcca
gtggggacctgcctagtgttgaatacactgacgggggaaacggtcaacttctccccctgc
agagacgtcatgactgagaaaaattacaaagccctgaagtacactaccgacagacgatac
tgtgaagtgggatttagctctgacataacaaaggagggaaggctccttatcggtgctcct
ggaggctactattttcaaggtcagatcatcagtgcaggactgcctgacatcgtcgacagt
gccaagagccagaatgccaaaccttatgtggcaggacaaacccattcccctgagactggt
ggatacgatcattaccatgggtattctgtggccactggcgagttcactggagactcaata
ccagattatgtggttggagtgcctaatgatcgcaacacagcaggctcagtcaaaatctat
aatggaaacacacctgactttttgggagttaaacgcacattcttcggctctcaggtggcc
tcttacttcggccacagcgttgcagtgactgatattaacaatgatggaatagacgacatc
ctaatcggggcgcccctcttcatggagcgtgtgtcgggccagcagttgcaggaggtgggc
caggtgagtgtgtacctgcagagagagcgctccaccttccactccaagccagaccagaag
ctgacaggttcccagttgtacggacgctttggcagcaccatcgcccccctcggtgaccta
gacaaggacggttttaacgatgttgctgtgggagccccatcctcgggcgttgaagggagg
gttttcgtctacatggggactagtgatggactgtctccccagtatacccaggtcatcgag
agtcccttccggtccctaggctctccagcacagtttggcttcaccctgagaggggccact
gacattgattcaaatggctacccagatctaattgttggtgcatggggagtcaataagatt
gctgtgtacagggctcaagccgtggtgatggccaagacccaactctccctctaccctgac
ttcctgaacccagatgtcaaggagtgtcagcgccccaccaccaacgagcctgtggcctgc
ttcacagtcatgatgtgcattagtgtgtctggccacagcattccagaggagatagttcta
gatgcagagcttcagctggacaagatgaaacagacaatggccaggaggaccctatttctg
cagaccaatctgccccaagagtattttcagctaaccattcagagagatgtgggagtggtc
tgcaggaaccaaaccgcttacctacggcatgagtcagagttcaaggacaagctcagcccc
atcttcatctccttgaactacagcctgtccaactcccaggaggccatgctgcatggccag
agagctgtggtcgcacagaccaggatcattctggactgcggagaggacaacgtctgtgtc
cctgacctgaggctgactgctgaagcaggtactgaccgtcttctgataggggatgaccac
cctgccctgctggtcatcacagcagagaacagaggagagggggcctacgagaccgagctg
gagatacgcccaccagccaacacacactaccagagtatggtgactgacagaaagggcttc
agcaagttgatttgtgctcagaagaaggagaaccagacggtggtgatggtctgtgagctg
gggaaccctatgaagcagggccagaagctcctggccggtctgttcttcagcgtggggaac
ctggaggaggtggagaatcacgtgtcattcacattacagatcaaaagcaagaacagccag
aaccctgacagtaatgtggcccatctgaggattgatgtcagcgctgaggcagctctggag
atgcgggggggctcctctccacctgagtgtgtcctgcccattgccaagtgggaacagaag
gagcatcctgctgacctagaggaggttggcccgctagtggaacacgtctatgagttgaga
aacctgggtccgagcacggtcaacgccagggtgcaggtagagttccctacccatcaccat
ggagacgtcctgctctatgtgttcgccaatgcttctgaggatttcctcacctgccacact
gactcccctgacatcgacccatatcagttggtgaagaccgggaatgctactgttggtaaa
gtgtataaggtcaaacagaatgaggtggcacagcaggagcctcagcgcaaagagaccgtt
cacgtgaactgcaccagtggagatacctgtctgaggtttgtgtgtgaggccacaggtctg
gagagaggctggagcgctgtggtgaaggtgatgtctcgactctgggtacagaccttcctg
gagaggccctatgagaattatgttctccactctacagcacgctttgaggttatagatatg
ccctccaagatccagcctgaagagctaccaagtggacaggctgagacccagaccagtgtg
gtgtggagggctcctgatggagagaaggaagtgccggtgtggtggattgttgtggctgtg
gtctctggcctcttcctccttgctctgctagctctgatcttctggaaggtggggttcttt
aatcgcaaccgtcccccgtgtgatgatgatgacgatgcagaacacctagctggggctgga
cagtcagaatacgctgagatgcccacaaacacagaggacaagcaagcataa
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