Oncorhynchus kisutch (coho salmon): 109893232 Help Entry 109893232         CDS       T09179                                  Name (RefSeq) collagen alpha-1(I) chain   KO K06236   collagen type I alpha Organism oki  Oncorhynchus kisutch (coho salmon) Pathway oki04510   Focal adhesion oki04512   ECM-receptor interaction oki04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:oki00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     109893232  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     109893232   09142 Cell motility    04820 Cytoskeleton in muscle cells     109893232  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:oki00536]     109893232 Glycosaminoglycan binding proteins [BR:oki00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    109893232 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  109893232 NCBI-ProteinID:  XP_031683073 Ensembl:  ENSOKIG00005002517 UniProt:  A0A8C7CN52 LinkDB All DBs Position LG6:complement(66477207..66498954) Genome browser AA seq 1449 aa AA seqDB search MFSFVDIRLALLLSATVLLARGQGEDDRTAGSCTLDGQYYNDRDVWKPEPCQICVCDSGT VMCDEVICEDTSDCPNPVIPHDECCPICPDDGFQEPKVEGPQGDRGAKGEPGPAGFPGND GIPGQPGLPGPPGPPGPPGLGGNFSPQMSGGFDEKSGGGMSMPGPMGPMGPRGPPGPPGS SGPQGFTGPPGEPGEAGSSGPMGPRGPAGPPGKNGDDGESGKPGRPGERGASGPQGARGF PGTPGLPGIKGHRGFSGLDGAKGESGPAGPKGEGGASGENGAAGAMGPRGLPGERGRAGP NGAAGARGNDGAAGAAGPPGPTGPAGAPGFPGGPGAKGEVGAQGARGGEGPQGSRGEAGN PGPAGAAGPAGNNGADGNPGTKGAPGSAGIAGAPGFPGPRGPPGPQGAGGAPGPKGNTGE VGANGAKGEAGAKGESGPAGVQGPAGPAGEEGKRGSRGEPGAAGARGAPGERGGPGSRGF PGSDGAAGPKGGPGERGGAGVAGAKGNTGEPGRNGEPGMPGSKGMTGSPGSPGPDGKTGP SGAGGQDGRPGPPGPVGARGQPGVMGFPGPKGAAGEGGKPGERGVMGPGGAVGAPGKDGD VGAPGAPGVAGPSGERGEQGAGGPPGFQGLSGPQGAIGETGKPGEQGLPGEGGAPGSAGS RGDRGFPGERGAPGPSGPSGARGSPGSAGNDGAKGEAGAAGAPGGQGPPGLQGMPGERGA GGLPGLKGDRGDQGVKGADGAGGKDGVRGMTGPIGPNGPAGSPGDKGETGAPGAVGPSGA RGAPGERGESGAPGPAGFAGPPGGDGQPGAKGEAGDNGAKGDGGAQGPAGPTGAPGPQGP AGNTGAKGARGAAGPPGATGFPGAAGRVGPPGPSGNNGPPGPPGPGGKEGQKGNRGETGP AGRPGELGAAGPPGAQGEKGQPGGDGPNGPSGTPGPQGIGGQRGIVGLPGQRGERGFPGL AGQLGEPGKQGPGGPSGERGPPGPMGPPGLAGAPGEPGREGTPGNEGSSGRDGAAGPKGE RGESGVAGASGAPGPPGAPGSVGPAGKSGDRGESGPAGPAGIAGPAGPRGPSGPAGARGD KGESGEAGERGMKGHRGFTGMQGPPGPSGQSGESGPAGASGPAGPRGPSGSAGAAGKDGM SGLPGPIGPPGPRGRSGEMGPSGPPGPPGPPGPPGPPGGGFDMGFIAQPAQEKAPDPFRH FRADDANVMRDRDLEVDTTLKSLSQQIENIRSPEGTKKNPARTCRDLKMCHPDWKSGEYW IDPDQGCTQDAIKVYCNMETGETCVYPTEADIPKKSWYTSKNIKEKKHVWFGEAMTDGFQ FEYGSEGSNAKDVNIQLTFLRLMATEASQNITYHCKNSIAYMDQQSGNLKKSLLLQGSNE IEIRAEGNSRFTYSVTEDGCTSHTGAWGKTVIDYKTTKTSRLPIIDIAPMDVGAPNQEFG IEVGPVCFL NT seq 4350 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggatattcggttagcgctgttgctcagcgcaacagtgcttttggca agaggacaaggcgaggacgatcgcaccgccggcagctgtacgttggacggtcaatactac aacgacagagatgtctggaaacccgagccatgccagatctgcgtgtgcgacagcggcacg gtcatgtgcgacgaagttatctgcgaggacacatccgactgccccaatccagtgatcccc cacgatgaatgctgccccatctgccccgatgacggcttccaggagccaaaggttgaggga ccccagggtgatcgtggagccaagggagagccaggacctgctggtttccccggcaacgat ggtattcccggccagcccggccttcctggacccccaggcccccctggaccccctggcctc ggcggaaacttctcccctcagatgtctggtggttttgatgagaagagcggtggtggcatg tccatgcccggccccatgggccccatgggtccccgtggtcccccaggacctcctggctca agtggacctcagggtttcactggcccccctggtgagcctggtgaggctggttcttctggt cccatgggtccccgtggtcctgctggtccccctggcaagaacggagatgatggtgagtct ggcaagcctggtcgccccggtgagcgtggcgcttccggcccacagggagctcgtggattc cccggaacccccggccttcccggcatcaagggacacagaggattcagcggtcttgatgga gctaagggagagtctggccctgctggacccaagggagagggtggtgcatccggtgagaac ggagccgctggagccatgggaccccgtggtctgcctggtgagagaggccgtgctggtccc aacggagctgctggtgctcgtggtaacgatggtgctgctggtgctgctggtcctcctggc cccactggccccgctggtgcccccggtttccccggtggccccggagccaagggagaggtt ggtgcccagggagctcgtggtggcgagggaccccagggatcccgtggagaggctggtaac ccaggacccgctggcgctgctggccctgctggaaacaacggtgctgacggaaaccccggt accaagggtgcccctggttctgctggtattgctggcgctcctggcttccctggaccccgt ggaccccccggaccccagggagctggtggagctcccggacccaagggtaacactggtgag gttggtgctaatggagccaagggagaggctggtgctaagggagagtctggccccgctgga gtccagggacccgccggccctgctggtgaggaaggcaagagagggtcccgtggtgagccc ggtgctgctggtgcccgtggagcccccggcgagcgcggtggccctggtagccgcggtttc cctggctctgatggagctgctggccccaagggtggccctggtgagcgtggtggcgccgga gttgctggagctaagggtaacactggtgagcctggccgcaacggcgagcctggtatgcct ggatccaagggtatgactggtagccctggcagccctggtcccgatggcaagactggcccc tctggtgccggtggtcaagatggtcgccccggacctcccggccccgttggagccagaggc cagcccggagtcatgggattccccggacctaagggagccgctggtgagggtggcaagcct ggtgagagaggagtcatgggacctggtggcgctgttggcgctcccggcaaagatggtgat gttggtgctcctggtgcccccggtgttgccggaccttctggagagcgaggcgagcaggga gccggtggcccccctggattccagggactttcaggaccccaaggtgctattggtgagact ggcaagcccggagagcagggtctgcccggtgagggtggtgcccctggttccgctggatcc agaggtgacagaggcttccccggtgagcgtggtgcccccggcccatccggaccctctggt gcccgtggctctcctggctctgctggtaatgatggtgctaagggagaggctggtgccgcg ggagcccccggtggccagggaccccctggcctgcaaggaatgcccggagagcgtggtgct ggtggtctgccaggcctgaagggagacagaggtgaccaaggagtcaagggtgctgatggc gccggtggtaaggatggcgtccgtggtatgactggccccatcggacccaacggccctgct ggctctcctggtgataagggagagactggcgctcctggagctgttggaccttctggtgcc cgtggtgcacctggtgagcgcggtgagtctggtgcccccggacccgccggattcgctggg cctcctggtggtgatggtcagcctggtgctaagggagaggccggagataacggtgccaag ggtgacggtggtgcccaaggacccgctggacctactggagcccctggacctcagggtcct gctgggaacaccggagctaagggcgcccgtggtgctgctggtccccctggtgccactggt ttccccggtgccgctggtagagttggacctcccggcccatcgggcaacaacggacccccc ggacccccaggccctggtggaaaggaaggacagaagggtaaccgtggtgagactggcccc gccggtcgtcctggtgagcttggagctgccggaccccctggtgcccagggagagaaggga cagcctggtggagatggtcccaatggaccctctggaactcccggacctcagggtatcggt ggacagcgtggtattgttggtctgcccggacagagaggcgagcgcggtttccccggcctc gccggacaactgggagagcctggcaaacagggacctggtggcccctctggtgagcgtgga ccccccggacccatgggcccccctggactggctggcgcacctggtgagcctggtcgtgag ggaactcctggtaacgagggatcttctggtcgcgatggtgctgctggacccaagggagag cgtggtgagtctggtgttgccggtgcttccggtgcccccgggccccctggtgcccctgga tctgtcggccctgctggaaagtccggtgaccgtggagagtctggtcctgctggccccgct ggtattgctggccctgctggtccccgtggcccatctgggcccgctggagctcgtggagac aagggagagtctggcgaggctggagagcgaggcatgaagggacacagaggattcactggc atgcagggaccccctggcccctctggacaatctggagagtcaggacctgctggagcctct ggccccgctggacctagaggaccttctggatcagctggtgccgccggtaaggatggtatg agcggtctgcccggccccatcggacctcccggaccccgtggtcgctcaggagagatggga ccctccggaccccctggccctcccggtccccctggcccccccggacctcccggcggtgga ttcgacatgggcttcattgctcagcctgctcaggagaaggcccccgatcccttccgtcac ttccgcgccgacgacgccaacgtgatgcgcgatcgcgacctggaggtagacaccaccctc aagagcctgagccagcagattgagaacatccgctctcccgagggcaccaagaagaacccc gcccgcacctgcagagacctgaagatgtgccaccccgactggaagagcggcgagtactgg atcgaccccgaccagggctgcacccaggacgccatcaaggtttactgcaacatggagacc ggcgagacctgcgtctaccccaccgaggctgatatccccaagaagagctggtacaccagt aagaacatcaaggagaagaagcacgtctggttcggcgaggcaatgaccgatggcttccag ttcgagtatggcagcgagggctccaacgctaaggatgttaacatccagctgaccttcctg cgccttatggccaccgaggccagccagaacatcacataccactgcaagaacagcatcgcc tacatggaccagcagtccggcaacctgaagaagtccctgcttctccagggctccaacgag atcgagatcagagccgagggcaacagccgcttcacatacagcgtcaccgaggatggctgc acgtcgcacaccggtgcatggggcaagacagtcatcgactacaagacaacgaaaacatcc cgtctgcctattattgacatcgctcctatggacgttggtgcacccaatcaggaatttggc attgaagttggcccagtctgcttcttgtaa

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