KEGG   Oncorhynchus kisutch (coho salmon): 109893319
Entry
109893319         CDS       T09179                                 
Name
(RefSeq) ras-related protein Rab-5C-like
  KO
K07889  Ras-related protein Rab-5C
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04137  Mitophagy - animal
oki04144  Endocytosis
oki04145  Phagosome
oki04148  Efferocytosis
oki05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oki00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    109893319
   04145 Phagosome
    109893319
   04137 Mitophagy - animal
    109893319
   04148 Efferocytosis
    109893319
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    109893319
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oki04131]
    109893319
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oki04147]
    109893319
   04031 GTP-binding proteins [BR:oki04031]
    109893319
Membrane trafficking [BR:oki04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    109893319
 Endosome - Lysosome transport
    109893319
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109893319
  Exosomal proteins of other body fluids (saliva and urine)
   109893319
  Exosomal proteins of colorectal cancer cells
   109893319
  Exosomal proteins of bladder cancer cells
   109893319
GTP-binding proteins [BR:oki04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    109893319
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase MCR_beta AAA_16 BrnT_toxin
Other DBs
NCBI-GeneID: 109893319
NCBI-ProteinID: XP_031683166
Ensembl: ENSOKIG00005036711
LinkDB
Position
LG6:complement(70137872..70154739)
AA seq 219 aa
MAGRGGPARTNGAAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPAGGAGGRAGGRAGVDLQEAAPQASGSKCCGGN
NT seq 660 nt   +upstreamnt  +downstreamnt
atggcaggtcgaggaggaccagcacggaccaacggcgcggcggccagcaacaagatctgc
cagttcaagctggtgctgctgggagagtcagcggtgggcaaatccagcttggtgctgcgc
ttcgtcaagggccagttccacgagtaccaggagagcaccatcggagctgccttcctcaca
cagaccgtctgcttggatgacacaacagttaagtttgagatctgggacactgcagggcag
gaacggtatcacagcctggcccctatgtactacagaggagcgcaggctgccatcgtggtc
tatgacatcaccaacacagatacattcacacgtgcaaagaactgggtgaaggagctccaa
cgacaagccagccccaacatcgttattgcactggcagggaacaaagctgacctggccaac
aaaagagctgtggacttccaggaagcacaagcgtacgcagatgacaacagtttgctcttc
atggagacttcagccaagacggccatgaacgtcaatgagatcttcatggccatagccaag
aagcttcctaagaacgagccagcgggtggagccggtggccgggccggtggtcgggcagga
gtggacctgcaggaagctgccccacaggctagtggtagcaagtgctgtggtgggaactaa

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