Oncorhynchus kisutch (coho salmon): 109893456
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Entry
109893456 CDS
T09179
Name
(RefSeq) transcription factor 20-like isoform X1
KO
K24769
transcription factor 20
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109893456
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
109893456
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
109893456
NCBI-ProteinID:
XP_020342275
LinkDB
All DBs
Position
LG6:76134497..76157820
Genome browser
AA seq
2548 aa
AA seq
DB search
MQNFPNSPAPPALPPGFTSRGGGGSSYPPPSTDPQISPRMTDDYTGMQQQTPPNPQSHSR
HLLHRGHHHPSQAGHMLAYDARNRAGESSHGNIHSGSSSNPYQKETMDYYFAMGGKDRHR
RGGMAYGAGFGYSNMDGHIPQQYRQAGTSSSGMMSPYPLDYGSTAGSGGSSSGSSGAGAF
SPSHQYKMGQNPAMQPASGPQMQHRQHGQNYPAHQALQHGQQHRTYPISGHRMPPQFSHY
SPQGSASTGSSGMYSSPPQRYHDGASSGGGFEAKVNNSPNMNSNSNSISSSATTNNVGSL
ENVAKSYHSSSYPSYSPQTHPLHKQATLQHRNSQHNLGIGYDNSLKMQHHAPPPGPVYSK
HHQSTNPGMPQQPCQEIAKSPMHSQPQQGQINQNFSPISNPSPAASAVQSPSCSSSPSPL
MGVSEGHGNPLCPPHVPSHPPPPNPRSCRGRLLQTLPQLSPTPNSNSSISSCGSSGSNKA
TGLNISAGGGHLVSNRSRMAAGTGKGSHEGSSSSVYSSSPLDKLMQDPGLNSLNALTSQV
ANLPNTVQHMLLTDTLISHRRGKDGQSQMLQALQAIPSTQPRSRSVSAASSSGIGGGEGA
GSEAGGDDDSFLVSERVSSRAKEERDEQISEGEKSRRRQMSGTSSGSEPTGYYPPPSQSQ
MSMGSSKNQSHTGKSDQGSQGKRMFTESSTKPSLNPSDVSERKTTETRTPSLSSPSSAPQ
SAEPGTSVHSRPPVSSTPSCPIPSPAPQFHPNCATDVNTKNGLRKTREIKYEGIKDESGG
MVEKNEKGTHGEQTREGHMRQDGQDKENKLDRSSLRNKKSDEKDGKRCKTRDLDNSNQDQ
NIEEQPNAGGVGVIVSTRCEVNHPEKATCAQDNCIEEKHSDSFFRESSRHNGEEGMDLSV
CSSHHEVSQKSNFGRSVPQNHPLSGPQKYGYQESPHGAAMGLKNRGRPSPGSVTGSNSRY
QGFHQPKPSYGPEHTKDVAGTTVEGSVRRREGSGARGHDDNSQLQHQFPSLLQEVLQGYH
LDRRYGRSEQALTAHLQAQNMTRQQYQTRHPYGMAESMRTQTGVGEVISHPSRMTSPGKP
LQLNQRQGPGSDFVPESPQSSLRSEGVDTKGSHSASSEKNKMATPQRHLTHMPQSTEFLS
GPPPKHINLADYSLPHRKPPSGLPSSSSAVQELLLQETEPLAGSVGTIGQIESQMLMSSL
LPPSKERRSVICDVCPNRRSTPERDGKREREREKSPIGASVIQLPSTNDLGNSKEMGVKK
EVGVKVASKETAEAVHHSGLTTKETDVEHHNKALHPSVVMNSEPLRRGKIDLTTTMPSQH
LQQTSHYPSTTNPLSPPSRHQSYPHGVDLSTGHASGFPGSRFGDAREGNMIPRNPHFHNP
YHSPQVQLQNPQSANKLQMYTHLHAHDLDDRLNWVTTINRPTKDMMQSSTSPGRHKLSHS
EQRQRMQSPTDILHNRQTFTKQQVPHQNTYYDMKMWESTHSGRESVGMLEGDPYQRSQQP
PPAAPLGSVAHQLVPTAPPVSNILESPVSQVVTEEIFKSLHPTPTPNSMKTVGPSIGGNV
NSVMPQSHRPNKTGGSGDTNPLMLRRRVRSFISPIPAKRQHQDVSQQRSAPSSYHSPLAY
SESSLQNDDDSSSSDITTLGSPNTPCPTPGQSTYSQSSSPVQGKKSLPPRKGRGLKLEAI
VQKITPNVKKSTNSGHTDVDSNDFAGFSHTEMSQFTDTQDEEECLPYLDESLSLSDIMPY
RGVDETGPLPPTAYPCDPHQTSQVLKRGTTGTVTRPLQPDFDFGLGTAASSTGDRDKEIH
ADFTLLGPLPPPPPLPCPVQGSPPPSSSALSDIQHFTNTYQQLETRRGEQSAANLLRQKL
EETGIGFDDYSSSDYYGTTPPHHSQAQGHLLRQPHQTSPRSSLAMTGSPQDSKQSDNSVP
KGYFPSGKKKGRPVGSVNKQKRAQATQAQAQNVSPSALSGPPIQSPATVSPQVAPSPSTT
ASAPSVTPPTDQKMTPPEIPPVLTQAVKVDAESEDTQPETEVKSVCQKQGGVKDESEVVG
SRGRQRRRRRGVAAAAAKDDLEAATRAGGHFDNSRVFPDNSKCAFAPYIHVERKVAEIGA
VCTIVNGEEEKMKGERGAVGGKASSSGIEALLTSALLSQLPRRDGEIERVKEKRELEDVD
SALQAGKALPSSEYLLPGPVITESIHSGRLLCCLCQKWANYKNLGDLYGPYYPPEYATRL
PKNQPQIRQSLVTTGMNRNVQNLDTISNVLTTQGRELQDVPTIKSSNYSDYMFNQETNTT
SPATAVGTASPAGGGEMLYLASKLAKTTTNKTTVLKWDMPPELKPITELRKQPELQNEPT
YSQQNQPCQQQQTEDTQQRPQHRKLTSHPRFKRRQKSSENSPRMVPSNSKASLPFQPPPP
TLDSLGPLAQLAQLPQMPIDPEELWVHEACMVWTSGVYLVNGRLYGLQEALDGARDTVCS
YCEMVGSTLGCYSKGCTLRYHYPCAMDADCSLNEDNFSLRCPKHKVKRESFPRAASQLNL
CTLSSLREAERDTEEEETQEYRIGMLGR
NT seq
7647 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatttccccaacagtccagcacctccagctcttcctcctggatttactagtagg
ggtggaggtggctcctcttacccaccaccgtcaacagatccccagatatccccaaggatg
accgatgactacactgggatgcaacagcaaacccctccaaaccctcaaagtcacagtcga
cacctactccatcgagggcaccaccaccctagtcaggctggccatatgcttgcttatgat
gcaagaaacagagctggggaatcatcacacggtaatattcacagtggcagtagtagcaac
ccgtaccaaaaggaaacaatggattattattttgcaatgggtggaaaggacagacataga
agaggaggtatggcatatggggcaggttttgggtactcaaatatggatggacatatacct
cagcagtacagacaagctggaactagctcctctgggatgatgtctccctatcctttggac
tatggttcgacggccggctcaggtggtagtagcagtggcagcagtggtgctggagcattt
tccccctcccatcagtacaaaatgggtcagaaccctgcaatgcagccagcatcagggcct
cagatgcagcaccgccaacatggacagaattaccccgcccatcaagctctgcaacatgga
cagcagcataggacttatcccatctctggacacagaatgcctccacagttctcacactac
tccccacagggtagtgcatccacagggtcatcaggaatgtacagctccccaccacagaga
tatcatgatggggccagcagtggtggtggatttgaagctaaagtcaacaactctcctaat
atgaactctaattcaaactcaatttcaagttcagctacaacaaacaatgttggatcactg
gagaatgttgcaaagagttaccactcttcaagttacccctcatactccccacaaacccat
ccactccacaaacaagccaccctccagcaccgcaattctcagcacaatttaggaataggt
tatgacaactctctcaaaatgcagcatcatgcccctccaccaggtcctgtatactctaaa
catcaccaatccaccaatcctggaatgcctcaacaaccgtgtcaagaaatagccaaatcg
ccaatgcattctcaaccccaacagggccagattaaccaaaacttcagccctatatctaac
ccctctccagctgcctctgcagtgcagtctcccagttgtagctcctcaccttccccattg
atgggtgtctcagaaggtcatgggaaccctttatgtcccccacatgttccatcacatcct
cctcccccaaatcctcgtagttgccgtggtcggttattgcagactttgcctcagttgagt
cccacacccaactccaacagcagcatcagtagttgtggcagcagtggcagtaacaaagct
actggtctgaatataagcgctggaggtggtcacttagtctcaaaccgaagcagaatggct
gccggtacaggaaaaggatcacatgaagggtcatcctcgtctgtctattcatcttctcct
cttgacaaactcatgcaagatcctggcttgaacagtctaaatgcgttgacatcacaggta
gcgaatttacccaatacagtgcaacatatgcttctcactgacacattaatatcacataga
agggggaaagatggacaaagtcaaatgctgcaggcattacaagccattccttctactcaa
ccaaggagtcgaagtgtcagtgctgcctcaagcagtgggattggtggtggtgaaggtgct
ggctcggaggctggaggtgatgatgattcctttctggtgtccgaaagagtatcatcaagg
gccaaagaggaacgcgatgagcagatttctgagggggaaaaatctagaaggcggcagatg
agtggcacaagcagtggatcagaaccaactggctactatcctcctccatctcagagtcaa
atgtccatgggttcaagtaaaaaccaatcccatactggaaagagtgatcagggttcacaa
gggaagaggatgttcacggaatcttctacaaaaccatctctgaatccatcagatgtttct
gaaagaaagacaactgaaacccggacaccttcattgtcatctccctcctctgctcctcaa
tctgctgagcctggtacaagcgtacattctcgccctcctgtttcctctactccctcatgc
cccattccctctcctgctcctcagttccacccaaactgtgccactgatgttaatactaaa
aatgggcttaggaaaacaagggaaattaaatatgaaggaattaaagatgaaagtggaggg
atggttgaaaaaaatgaaaaaggcacccatggagagcagacccgagagggacacatgcga
caagatgggcaggacaaagaaaataaattggatcgatcttccttgcgtaacaaaaagagt
gatgagaaggatggaaaacgatgtaagacacgagatttggacaactccaatcaagatcaa
aatattgaggaacagccaaatgctggtggagtgggtgttattgtgtcaactcgttgtgag
gtaaatcatccagaaaaagctacatgtgcacaagacaactgcatagaggagaaacattca
gacagcttctttagagagtctagtcgtcataatggggaggaaggaatggatttgagtgta
tgttcctctcatcatgaagtttcccagaaatctaactttgggcggtctgtccctcaaaat
catcccctctcaggtcctcaaaaatatggttatcaagagtcaccacatggtgctgccatg
ggtttgaagaacagggggagacctagtccagggagtgtaactggatcaaattcaaggtat
caaggcttccatcagccaaagcccagttatgggcctgaacacaccaaggatgtcgcgggt
actacagttgagggatcagtgaggagaagagaaggatcaggggcaagaggacatgatgat
aattctcaactccagcatcaatttccaagcctcttgcaggaggttctacagggttatcac
ttagaccggcgctatgggcgatctgaacaggcactaactgcccatctccaggctcaaaat
atgactcggcaacagtaccaaaccaggcatccttatggcatggctgaaagtatgagaacc
caaactggagttggagaggtcatttcccacccctcccgaatgacaagccctggaaagcct
cttcaactaaatcagcgccaggggcctggatctgattttgtaccagaatcacctcaatcc
tccttgaggtctgaaggagtagatactaagggatctcacagtgcttcttcagagaaaaat
aaaatggcaacaccgcagcgtcacctgacccatatgccacagtctacagagtttttgtct
ggacctccaccaaaacacatcaatttagccgactactcgttacctcacaggaaaccccct
tcaggtctgcccagctcatcatcagctgtacaggaactcctattgcaggaaacagagccg
ctagcgggcagtgttggaaccataggtcaaattgagtctcaaatgttgatgtcctccctt
ttacctccatctaaagagcgccgctctgtcatatgtgatgtttgtcccaatcgccgcagt
acaccagaaagggatgggaaacgtgaaagagagcgggaaaaaagtccaattggtgcctct
gtcatccaacttccatcaacaaatgatctagggaacagtaaggagatgggagttaaaaaa
gaagttggagtgaaggtagcatcaaaggagactgcagaggctgtccatcatagtggtctt
acaaccaaggaaactgatgttgagcatcataacaaggctttacacccatctgtggttatg
aattcagagcctcttagaagaggtaagattgatttgaccaccaccatgccctctcaacat
ctgcagcaaacctctcactatccctctaccaccaaccctctgtctccaccatcaagacat
cagtcatacccacatggtgtagatttatctacagggcatgccagtggctttcctggttcc
aggtttggtgatgcaagagagggcaatatgattccacgtaacccccattttcacaatccc
taccactcaccccaagttcaattacaaaacccacaatccgcaaacaaattacaaatgtat
actcacctccatgctcatgacttggatgacagacttaattgggtaactaccattaataga
cccaccaaggatatgatgcagtccagtacttctccaggtagacataaactcagtcattca
gagcagagacaaagaatgcagtctccaactgacattttgcacaatcgccaaacgttcact
aaacagcaagttcctcatcagaacacttactatgacatgaaaatgtgggagtcgacacac
tctggtagagagagtgtggggatgttggagggggatccttaccagagaagtcaacagcca
cctcctgctgctcctcttgggtctgttgcccaccaattggttccaacagctccaccagtc
tccaacattcttgaatcacctgtctcccaagtggttacagaagaaatctttaaatcactc
catccaacacctacacctaattccatgaaaacagttggtcccagtattggtggcaatgtc
aattccgtgatgccacagagccatcgaccaaataaaactgggggttctggggacactaat
ccattaatgttgaggaggagagttcgatctttcatttcccctatccctgccaagaggcag
catcaggatgtatcgcagcaaaggagtgcccctagttcatatcactcacctttggcctac
tctgaatccagcctccaaaatgacgatgactcatccagttcagatataactacacttggt
tcgcctaatactccttgtcccacacctggacaaagcacgtattcacaatcctcctcacct
gttcagggtaagaagagtctgcctccaagaaaagggagaggtttgaaactggaggctatt
gttcagaaaattacaccaaatgtgaagaaatctactaacagcggccataccgatgttgac
tcaaatgattttgctggattttctcacactgaaatgtcacagtttactgacacacaggac
gaagaggaatgtttaccttatctcgatgaaagtctctcattaagtgacattatgccctac
agaggggttgatgagactggaccgttacctcccaccgcatacccctgtgatcctcaccag
acatcacaagttcttaaacgcggcaccacaggaactgttacaagacctttgcagccagac
tttgactttgggttagggactgcagcatctagtactggtgatagagataaagagatacac
gctgacttcaccttgttagggcccttacccccacctccaccactaccttgtccagtacag
ggctcccccccaccgtcttcatctgccttgtctgatattcaacatttcactaatacttac
cagcaacttgagactcgaagaggtgaacaatctgctgctaaccttctgagacaaaaactt
gaagaaactgggattggatttgatgattacagtagcagtgactattatggaaccacccca
ccacaccacagtcaggctcaagggcacttactaagacagccacatcaaacttctccaagg
tcatctttggcaatgacagggtcaccacaagattccaaacaatcagacaattctgtaccc
aaaggctatttcccatcaggcaagaagaagggaaggcctgttggaagtgtgaataagcaa
aaacgtgctcaagccacccaggcccaggcacagaatgtgagcccaagtgctctgtctggc
ccacctattcaatctcctgcaactgttagtccacaggtagccccaagccctagcactaca
gcctctgccccatcagtcactcctccaactgatcagaaaatgactcctccggagattcca
ccagtcttgacccaagcagtaaaagtggatgctgaaagtgaggacactcagccagagact
gaggtgaaatcagtctgccagaaacaagggggggtgaaagacgagagtgaggtagtggga
tcaagaggcaggcagaggaggagaagaagaggagtagcagcagcggcggccaaagatgac
ctggaagcggctacaagagcagggggacattttgataacagcagagtttttcctgataat
agcaagtgtgcctttgcgccatacatacatgtggagaggaaagtagctgagataggagcc
gtgtgcacaattgtgaatggtgaagaggaaaagatgaagggagagcgtggagcagttgga
gggaaagcaagcagtagtggtattgaagctcttttgacctcagctcttttgtctcaactg
ccaaggagagatggagaaattgagagggtcaaagagaagagggaactggaggatgtagac
tctgccctccaggcaggaaaggctctaccttcatctgagtaccttctaccaggccctgtg
attactgaatccattcattctggccgtcttctctgctgcctgtgccagaaatgggccaat
tacaaaaaccttggggatctctatggaccttactaccctcctgaatatgctacaaggctt
cccaagaatcaaccccagattcgacagagtcttgtaactactgggatgaatagaaatgtg
caaaatctagacaccatttcaaatgtgttgaccacccagggccgcgaactgcaagatgtg
ccaactatcaagtcctcaaattatagtgattacatgttcaatcaagagacaaatacaact
tcccccgccactgctgttggcactgcctctccagcaggtggaggggagatgctttatctg
gccagcaaacttgctaaaaccaccaccaacaagacaacagttcttaagtgggacatgcct
ccagagttaaaaccaattactgagctaaggaaacaacctgaacttcagaatgagcccact
tacagtcagcaaaaccaaccatgccagcaacagcagacagaagacactcaacaaaggcca
caacacagaaagctgacgtcgcacccgagatttaaaaggagacagaaatccagtgaaaat
tccccaagaatggtgccatccaacagcaaagcctcattgccattccagccccctccccca
accttagactcccttgggcctttggcacagctggcccaacttcctcagatgcctatagac
ccagaggagctgtgggtgcatgaggcatgcatggtctggacaagtggggtttacctggtc
aatggaagactgtatggcctacaggaggcactagatggtgccagagacacagtctgctct
tattgtgaaatggttggctcaaccctcggctgttacagcaaaggctgcacactgagatat
cactacccgtgtgccatggatgcagactgctctctgaatgaagataacttttcactacga
tgtccaaagcataaggtaaaaagggagagtttccccagagcagccagccagctaaacctg
tgtaccttgagcagtctgagagaggctgagagagacactgaggaggaggagacgcaggag
tataggatcggtatgcttggacgatga
DBGET
integrated database retrieval system
