Oncorhynchus kisutch (coho salmon): 109893482
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Entry
109893482 CDS
T09179
Name
(RefSeq) serine/arginine-rich splicing factor 3-like
KO
K12892
serine/arginine-rich splicing factor 3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03040
Spliceosome
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109893482
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109893482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109893482
Spliceosome [BR:
oki03041
]
Common components
Common spliceosomal components
SR proteins
109893482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
109893482
NCBI-ProteinID:
XP_020342305
Ensembl:
ENSOKIG00005027940
UniProt:
A0A8C7I7E6
LinkDB
All DBs
Position
LG1:complement(42071688..42079525)
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AA seq
172 aa
AA seq
DB search
MGEPAHLRDCPLDCKVYVGNLGNSGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDP
RDATDAVRELDGRTLSGCRVRVELSNGEKRSRSRGPPPSWSRRPGRDDYSSRRRGSPPVR
RRSPRRRSFSRSRSRSPSRDRRRDRSISRDRNHKPSRSFSRSRSRSRTTERK
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgggagaacctgctcatctcagagattgtcctcttgattgtaaggtatatgttgggaac
ttgggcaacagtggaaacaagactgagttggagagggcgtttgggtactatggccccctg
cgtagtgtgtgggtggcgaggaaccccccaggctttgcctttgtcgagtttgaggacccc
agagatgcaactgatgctgtgagagaattggatgggaggactctgtctggctgcagagtg
agagttgagttgtccaatggtgagaaacgctcgaggagccgcggacctccaccctcctgg
agccgtcgccctggacgtgatgactacagcagcaggcgccgtggtagcccgcctgtcaga
cgccgctctcctaggaggaggagcttcagccgcagtcgcagcaggtctccgtcacgagac
agaaggagagataggtctatctccagagacaggaaccataaaccttcaagatccttctca
aggtcccggagccgctctaggaccacggagagaaagtga
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