Oncorhynchus kisutch (coho salmon): 109893541
Help
Entry
109893541 CDS
T09179
Name
(RefSeq) ATP-dependent DNA helicase Q5-like
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oki03400
]
109893541
Enzymes [BR:
oki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
109893541
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
109893541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ5
RecQ_Zn_bind
TFIIS_M
ResIII
SRI
Motif
Other DBs
NCBI-GeneID:
109893541
NCBI-ProteinID:
XP_031690487
Ensembl:
ENSOKIG00005017883
LinkDB
All DBs
Position
LG10:complement(62878801..62896952)
Genome browser
AA seq
1047 aa
AA seq
DB search
MTSIKKALKTHFGFDKFRSQKQEDVVKAVVKGDRDVFVCMPTGAGKSLCYQLPAVLAKGI
TLVISPLIALIQDQVDHLRDLNIPACSINSKLPAGERRLILADLESESPRLKLLYITPEM
VASSAFQPCLTGLLSRSLLSYLAVDEAHCVSQWGHDFRPDYLKLGSLRARLPGIPCVALT
ATAPQKVQEDIAKSLRLRSPLSFATPVFRSNLHYEVVYRELLEDPYKHLHAFIREALTLG
EGPKGQGCGIVYCRTRDGCETVAYQLTKLGVLAKPYHAGLKAGDRTEAQTDWMQGKVLVI
VATISFGMGVDKSNVRFVAHWNLAKSLASYYQESGRAGRDGLPSSCRTYYSPKDREQLNF
LIRKEVARKQAKRGSEKDQDKASITDFEAMVSFCEQEGCRHATISKFFGDQKPDCAGACD
YCRDPKAVRAQLEKGATLCTKTGAAWSTQPRGPFGFDRDLYAGGRKGYGFERHDEEGWES
GGDDDGSEHRRKEFGDLFKKQMNLRKVSEGHKDSFIPPDDNCPLREASSQKIPRLTVKAR
EHCVALLQEALNNHQVAAADTHSSDTLSLAVDIEHEVFKITKSSNLYKAAVLKRVSEMKK
GGAASAGGGGREGTSGSGESTEIKTESKDEAASSSSSLTEEQQGFTPASQIYSLKRKRIG
AGLRGSSNPFQTASDLLRASNCEGSTTGPGANSGTGSGGPDCLAGSGESAGEEERGKRKE
TKTGDTAPTISSSIRAKASAVSAFLNSPTKTGGKALSKKQKLAEAAKNSRNITQYFGKKP
IENSQEVEIRTNDVSSQAFSIPPQSLPTQEITPATVSMDTIPMDTSPMEIIPMETIPIET
IPMDTIPTEINNLDNDDEEVKEEAKLDLDSITVQNAHENKAKSLLKLRLCEDSEESEALP
SAKRSCPLQDSRKKVTFNPKVQETVLEPGSPSKAPKPVSLKEVADIVVRCLDPFYTQGKF
ATKELFKSFARYLSHLLAEGRSRGRGQVKMQARNLIKKFFSSVKRCESEADWKHLKGPHS
TETSEHRGMGGGGTMNRKVEEDNNLGV
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgacttccattaaaaaggcgttaaaaacccattttgggttcgataagttccgatcccag
aagcaggaggacgttgttaaagcagttgttaaaggtgaccgggatgtttttgtgtgcatg
cccaccggggcagggaagtccctctgctaccagcttcccgcagtgttggctaagggtatt
accttggtcatatcccctcttatcgctctcatccaggaccaagtggaccacctaagggac
ctgaacattcctgcatgctccatcaactccaagctccctgcaggggagcgccgtctgatc
ctggccgatctggagagtgagagccccaggttgaagctgctttacatcaccccagagatg
gtggcctcctctgccttccagccctgccttacaggcctactctcccggagcctcctctcc
tacctggctgtggacgaggctcactgtgtctcccagtgggggcatgacttcagaccagac
tacctcaaactgggcagtctgcgtgcccgtcttcccgggataccctgcgtggcgctgacg
gccacggcaccccagaaggtgcaggaggacatagcaaagtccctgaggctgcgatcacct
ctgtcctttgccacacctgtgtttcgcagtaacctgcattatgaggtggtgtacagggag
ctactagaggacccctacaagcacctacatgccttcatcagggaggccctgaccctgggg
gaaggccccaaaggacagggttgtggaattgtgtactgtcggaccagagatggctgtgag
acggtggcttaccaactgactaagctgggagtcctggccaagccttaccatgcagggttg
aaggcaggagatcgcacagaggctcagactgattggatgcagggtaaggtgcttgtcatt
gtggccaccatcagctttggcatgggggtggacaaatctaatgtcaggtttgtggcccat
tggaaccttgccaagtcactagccagttactaccaggaatctgggcgtgcggggcgagac
ggcctgccctcttcctgcaggacgtactactcccccaaggacagggagcagttgaacttc
ctcatccgcaaggaggtggcccgcaaacaggcaaagcgtggctccgagaaagatcaagac
aaggcttccatcacagacttcgaggccatggtgtcattctgtgagcaagagggctgtcgc
catgccaccatctccaagttctttggggaccagaagccggactgtgcgggggcctgtgac
tactgtcgtgaccccaaggctgtgcgggcccagctggagaagggggccactttgtgcacc
aagactggagcagcttggagtacacagcccaggggcccatttgggtttgaccgtgacctc
tacgccggggggaggaagggctacggctttgagaggcatgatgaggagggctgggagagt
ggtggtgatgatgatggctccgagcatcggaggaaggagtttggagatctcttcaagaaa
caaatgaacctgcgcaaggtgtctgagggacacaaagattcatttatccccccagatgat
aactgcccactcagagaggccagcagccagaaaatccccaggctcactgtcaaggcccgg
gagcactgtgtggccctgttacaggaggctctgaacaaccaccaggtggcagcagcagac
acacacagctctgacacactctccttggcagtggatattgaacatgaggtcttcaagatc
accaagtcttccaacctgtacaaagcagctgtcctgaagagagtatcagagatgaagaag
ggaggggctgcctctgcaggaggaggaggaagagaagggaccagcggctctggggaatcc
acagagataaagactgaatccaaagacgaagcagcctcctcctcttcctccttgactgag
gagcaacagggcttcacgcctgcctcacagatctactcactaaagcggaagagaatagga
gcaggtctgaggggctcctccaaccccttccagactgccagtgatctgctgagggcctct
aactgtgagggctccactacaggtccaggggccaacagtgggacagggagcgggggccct
gactgcctggctgggtctggagagtcagctggtgaggaggagagggggaagaggaaggag
acaaagactggagatacagcaccaaccatcagctcctccatcagagctaaagccagtgca
gtctctgccttcctgaacagtcccaccaagacaggaggcaaggccctgagcaagaagcag
aagctagcagaggctgctaagaactcccgcaacattacccagtactttgggaagaaaccg
attgaaaacagtcaagaggtagagataagaaccaatgatgtgtcatctcaggccttttca
ataccacctcagtcactccccactcaggaaatcacacctgctactgtctccatggatacc
atccctatggacactagtcccatggaaatcatccccatggaaaccatccccattgaaact
atccctatggacaccatccccacagaaatcaacaacttggataatgatgatgaggaggtt
aaagaggaagctaaactggacttggactctatcacagtgcaaaatgcacatgaaaacaag
gctaaatcgttgctaaaactaaggctatgtgaggacagtgaagagagtgaggccctcccc
tcagccaagcgtagctgccccctacaggacagcaggaagaaggtgacctttaaccccaaa
gtccaggagactgtactggagccagggagcccaagcaaagcccccaagcctgtgtctctg
aaggaggtggctgacattgtggtgcgctgtctagaccccttctatacgcagggcaagttt
gccaccaaggagctgttcaagtcatttgcccgctacttgtctcatctactagcagagggg
aggagtaggggaagaggtcaagtgaaaatgcaggccaggaatctgattaagaagttcttc
agcagtgtgaagcgctgtgagagtgaagcagactggaagcacctgaagggaccacacagc
actgagacctctgaacacagagggatgggaggaggcgggactatgaacagaaaggtggag
gaggataacaacctgggggtctga
DBGET
integrated database retrieval system
