Oncorhynchus kisutch (coho salmon): 109893543
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Entry
109893543 CDS
T09179
Name
(RefSeq) platelet endothelial cell adhesion molecule-like isoform X1
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04148
Efferocytosis
oki04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
109893543
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109893543
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oki04090
]
109893543
00536 Glycosaminoglycan binding proteins [BR:
oki00536
]
109893543
04091 Lectins [BR:
oki04091
]
109893543
CD molecules [BR:
oki04090
]
Proteins
109893543
Glycosaminoglycan binding proteins [BR:
oki00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
109893543
Lectins [BR:
oki04091
]
I-type lectins (Siglecs)
109893543
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
Ig_C17orf99
ig
I-set
V-set
C2-set_2
Zwei_Ig_N
DUF5546
Motif
Other DBs
NCBI-GeneID:
109893543
NCBI-ProteinID:
XP_020342381
Ensembl:
ENSOKIG00005017758
LinkDB
All DBs
Position
LG10:62798820..62807279
Genome browser
AA seq
692 aa
AA seq
DB search
MDSPPLYLPLLLLTSLPTLWQGAGAQSLFTIDSVTLKLDPSGEVTSGTFMDLNCEVSVSH
HQSHPLTHSFNFLRDDVLVYSKNTTEPAVLHQLTPARAANSGTYKCQVIVQDKSKGSSTH
RLTITGLQTPVLQVTSQILFEGDEVAATCSAPDESGSLLFHFYQDQEKIKQVRASGNSVG
TRLELKHAGDKHLRCYFETTMLPDAGRSNNSNTVKVMVKELFSKPVLVMKPREVFEIERF
TLNCDTDRYSHERINIGDVKYSLFRNQVLLTSGGNYTATAHPSLNGNYSCQAQALGRGQT
KKIFKNSTQIVLKAKVPVSVPLLSVVGGRLILGKPFQLQCQSDNGSLPITYTLLSPHRQA
EFRVVHSPWDLALFNITSIHRSSDIHSFSCKAENNPSQPYMESSGYHLRRTATIIEPVSR
PVLTLTPKMGDVAEGEDLTLTCTVQRGTPPITYTWYHTKGALPLVSKTTNDMRLSHLVQG
VSREHGGRYYCITNNPSKDSQRSAMVTVGVKLAGWKKGLIAAFCILLTVSLIIIIILVKK
CLLPFRRERTVELSVKPASTKTDKTLRLTHGEVNEAANVTPGVMGRSVWSDHVSGSESDD
QTREETEVPEPQYTEVHPQEVDPTRAPVKKGTDTVYSEVRNSNQGESESEQADGQGSVEY
AQLNHNDHESEEPEHEPEPKPEQGSEQDGQLE
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggactccccaccactctacctgcctctgctgctgctgaccagtctgcccaccctctgg
caaggggcaggagctcagtcattattcaccatagatagtgtgacactcaaactggaccca
agtggtgaggtaaccagtgggacctttatggacctgaactgtgaggtcagcgtcagccat
caccagtcccaccccctgacacacagcttcaacttcctgagagacgatgtcctggtctat
tccaaaaacaccaccgaacctgcggtccttcaccagctcaccccggccagggctgccaac
tctggcacttacaagtgccaggtcatagttcaagacaagagcaaaggcagcagcactcac
agactcaccatcacaggcttgcagacgcctgtgctgcaggtgacctcccagatcctgttt
gagggggatgaggtggcagctacctgcagcgccccagatgagtctggctccctgctcttc
cacttctaccaggaccaggagaagatcaagcaggtgagggccagtgggaactcagtgggg
accaggctggagctgaagcatgctggggacaaacacctgcgctgttactttgaaaccacc
atgctgcctgatgctgggaggtccaacaacagtaacactgtcaaggtcatggtcaaagag
ttgttttccaagccagtcctggtgatgaagcccagagaggtgtttgagatagagcgcttc
acactgaactgtgatactgaccgctattcccatgagagaatcaacattggggacgtgaag
tactccctgttcaggaaccaggtcctactgacatcaggagggaactacactgccacagca
cacccctcccttaatggaaattactcctgccaggcccaagccctaggaagaggccaaacc
aaaaagatcttcaaaaacagcacacagattgtcctcaaggcaaaagtgcctgtgtcagtc
cctcttctgagcgtggtagggggcaggttgatcctgggcaagcccttccagctacagtgt
cagagtgacaacggtagtctgcccatcacctacaccctgctgagcccccacagacaagct
gagttcagagtggtccacagtccctgggatctggctctcttcaacatcacctccatccac
aggagctctgacatccacagcttctcctgcaaggccgagaacaaccccagtcagccctac
atggagagctcaggatatcacctccgacgcactgccaccatcatagagccagtgtccagg
ccagtactgaccttgacacccaaaatgggggacgtggctgagggggaggacctgacccta
acctgcactgtccagcggggcacgccccccatcacctacacatggtatcacacaaagggt
gccctgcccctggtgtccaagaccaccaatgacatgcgattatcccacttggttcaaggt
gtcagtagagagcatggaggcagatactactgcatcactaacaacccatccaaggacagc
caaaggagtgccatggtcactgttggagtgaagttggctggctggaagaaggggctgatc
gcagccttctgcatcctgctcacagtgtctctcatcatcatcatcatcctcgttaagaaa
tgccttcttccattcagaagagagagaacagtggaactgtcagtgaagccagcaagcact
aaaacagacaagactctgagactgacccatggagaagtcaatgaggctgccaatgtcact
cctggggtcatgggaaggagcgtctggagtgatcacgtctcaggctcagagtctgacgac
cagaccagagaggaaactgaggtacctgagccacaatacactgaggtccatccccaggag
gtagaccccaccagagcccccgtgaagaaaggcacagacactgtgtacagcgaagtgcgg
aattcgaatcaaggtgagtcagagtccgaacaagctgacggccaaggctcagttgagtat
gcccagttaaaccacaatgaccatgagtcagaagaaccagagcatgaaccagagccaaaa
ccagaacaaggatcagagcaagacggacaacttgaatga
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integrated database retrieval system
