Oncorhynchus kisutch (coho salmon): 109893546
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Entry
109893546 CDS
T09179
Name
(RefSeq) THO complex subunit 4-like
KO
K12881
THO complex subunit 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03013
Nucleocytoplasmic transport
oki03015
mRNA surveillance pathway
oki03040
Spliceosome
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109893546
09122 Translation
03013 Nucleocytoplasmic transport
109893546
03015 mRNA surveillance pathway
109893546
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109893546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109893546
03041 Spliceosome [BR:
oki03041
]
109893546
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109893546
TREX complex
109893546
Spliceosome [BR:
oki03041
]
Complex C
Other components
EJC/TREX
109893546
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
109893546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
109893546
NCBI-ProteinID:
XP_020342384
Ensembl:
ENSOKIG00005002090
UniProt:
A0A8C7F0E7
LinkDB
All DBs
Position
LG6:78975009..78978504
Genome browser
AA seq
268 aa
AA seq
DB search
MADKMDMSLDDIIKQNRQQRGGAGGRGGGRGRGRGGSGGGRGGGVGRGAAGGGFGGRGGG
SGPMRNRPNLSRGRARPTPYSRPKQLPDKWQHDMYGNHGFNASVGGGGGGAGVETGGKLL
VSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGV
PLDGRPMNIQLVTSQIDTQRRPPMQGMNRGGGGMNRGRGGGFRGMQRGRGAGRGGGRGRG
GRGGSTKPLSAEELDAQLDAYNARMETS
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaatggatatgtcgctagacgacatcatcaagcagaacaggcagcagaga
gggggcgcaggaggccgtggtggtggaagaggccgtggccggggaggctctggcggtggc
cgaggtggtggtgttggccgtggagcagctggtggaggctttgggggccgaggtggagga
tcgggccccatgaggaaccgaccgaacctgagccgtggcagagcaagacctacgccatac
agcaggcccaagcagcttcctgataaatggcaacacgacatgtacggcaatcatggcttc
aatgccagtgttgggggcggcgggggtggcgctggtgtggaaaccggagggaagcttctt
gtctccaatctcgactttggcgtttcagacgcagatattcaggagctctttgcagagttt
ggtacactgaagaaggcagctgttcactatgaccggtcgggcaggagcttaggcactgca
gatgtccactttgagaggaaggcagatgctctaaaagctatgaaacagtacaacggtgta
ccacttgatgggcggcccatgaacatacaacttgtcacatcacagatcgacacacaaaga
cgaccacccatgcagggtatgaaccgaggaggtggtggcatgaacaggggtcgtggtggt
gggtttagagggatgcagagaggacgtggagcaggacgtggaggaggcaggggccgaggt
ggccgcgggggaagcactaagccactttccgctgaagagctggatgcccagctagatgcc
tacaatgccaggatggaaacaagctaa
DBGET
integrated database retrieval system