Oncorhynchus kisutch (coho salmon): 109893578
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Entry
109893578 CDS
T09179
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like
KO
K03267
peptide chain release factor subunit 3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109893578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109893578
03012 Translation factors [BR:
oki03012
]
109893578
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
109893578
Translation factors [BR:
oki03012
]
Eukaryotic type
Release factors
109893578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
109893578
NCBI-ProteinID:
XP_020342438
Ensembl:
ENSOKIG00005030890
UniProt:
A0A8C7MSQ3
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All DBs
Position
LG6:complement(84325593..84341749)
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AA seq
579 aa
AA seq
DB search
MDPRDAAPDSWEQEDDVEAPVDGKLDSEFAALNVNAKPFVPNINAVEFVPSFFQKGPSED
PDSGADVEPVVATMEVAETAAPVENGDSEMTTEETWDLKGVEPNEEEPGGGPGGDGGPIV
VEEILEEEVLEEEEDVPIIPKVVALPPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGM
VEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAP
GHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIILVN
KMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEPVESCTWYT
GLPFIPHLDSLPNLNRVSDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQLVMMPNRHT
VEVLSLLSDDVETDDASPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVII
EHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTA
GTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVAERD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacgctgcccctgattcctgggaacaagaggatgatgttgaggccccg
gtcgacgggaaactcgattccgaattcgccgccctcaatgtgaatgccaaaccgtttgtc
cccaacataaatgccgtcgaatttgtcccgtccttctttcagaaaggcccctcggaagat
cctgattccggtgctgatgttgaaccagttgttgccaccatggaggtcgcagaaactgca
gccccggtggagaatggtgattctgaaatgaccacagaggagacatgggacctgaaaggg
gtggagcccaatgaggaagaaccaggaggagggcctggtggcgatgggggaccaatagtt
gttgaggagattctggaggaggaagtcctagaggaggaggaagacgtgccaatcatacct
aaagtggtcgccctcccaccagacgcgcccaagaaggaacatgtgaacgtagtgttcatc
ggtcatgttgatgctggcaagtctaccatcggaggacaaatcatgtatttaacaggcatg
gtagagaagagaactctggagaagtatgaaagagaagccaaggagaagaacagggaaacc
tggtacctctcctgggctctggacactaaccaggaggagcgagacaaggggaagactgtg
gaggtgggcagagcgtactttgaaactgagaaaaagcactttaccatcctggatgcgcca
ggccacaaaagctttgtgcccaatatgatcggaggagcgtcgcaagctgacctggctgtg
ctggtgatctcagccaggaagggagagtttgagacgggctttgagaagggtggacagaca
cgggagcacgccatgttggccaaaacggcgggggtgaagcatctgatcatcctcgtcaac
aaaatggatgaccccacagtgaactggagcctagagaggtacgaagaatgcaaggaaaaa
ctagtgccatttttgaagaaggttggcttcaacccgaagaaagacattcacttcatgccc
tgctctggcctcacaggagccaacctcaaggagcctgttgagtcgtgcacatggtataca
gggttaccattcattccacatctggacagtttgccaaacttaaacagagtgagcgacgga
ccagtcagattacccatcgtagacaaatacaaggacatgggtactgtcatcctggggaaa
ctggagtcggggtccatcagtaaagcacagcagcttgtcatgatgccaaacaggcacaca
gtggaggtgttgagcctgctgagtgatgatgtggagacagacgatgcttctcctggagag
aacctgaagctgagactgaagggcatcgaggaggaggagatcctgccaggcttcatcctc
tgtaacgctgaaaacctctgccactctggacgcacctttgatgcccagattgtcatcatt
gaacacaagtccattatctgccctggttacaatgctgtcctccacatccacacctgcatc
gaagaagtgcaaattacggccttaatctgtctggtagacaagaagtcgggagagaaaagt
aagacgcgaccgcgctttgtgaaacaggaccaggtgtgcattgcccgtctgcgcactgcc
ggaaccatctgccttgaaaccttcaaagacttcccccagatgggacggttcaccctacgg
gatgaaggtaagaccattgccattggtaaggtgttgaagctcgttgctgagagggactga
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